RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 LIG3P49916 1009 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 LMNTD2Q8IXW0 634 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 MB21D1Q8N884 522 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 NACC1Q96RE7 527 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 PFDN4Q9NQP4 134 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 KMT5AQ9NQR1 393 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 KLHL14Q9P2G3 628 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 FAN1Q9Y2M0 1017 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 A0A1B0GUA9 196 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 RAD17O75943 681 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 PTPREP23469 700 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 CCT5P48643 541 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 SNX1Q13596 522 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 ARL6IP4Q66PJ3 421 aaKnown RBP17.44■□□□□ 0.38
PTPN11-201ENST00000351677 BRINP3Q76B58 766 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 TRIM50Q86XT4 487 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 ADPGKQ9BRR6 497 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 WDR11Q9BZH6 1224 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 TYW1Q9NV66 732 aaKnown RBP17.44■□□□□ 0.38
PTPN11-201ENST00000351677 CDC27P30260 824 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 MIGA2Q7L4E1 593 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 MB21D2Q8IYB1 491 aaPredicted RBP17.44■□□□□ 0.38
PTPN11-201ENST00000351677 SEPT10Q9P0V9 454 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 PNMA6FA0A0J9YX94 578 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 TTBK2Q6IQ55 1244 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 GABPB2Q8TAK5 448 aaPredicted RBP17.44■□□□□ 0.38
PTPN11-201ENST00000351677 ATP2A3Q93084 1043 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 PI4KBQ9UBF8 816 aa17.44■□□□□ 0.38
PTPN11-201ENST00000351677 CLCN6P51797 869 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 LY9Q9HBG7 655 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 UNC13BO14795 1591 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 FAM47CQ5HY64 1035 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 NSMCE1Q8WV22 266 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 TRPC5Q9UL62 973 aaPredicted RBP17.43■□□□□ 0.38
PTPN11-201ENST00000351677 TOGARAM2Q6ZUX3 1019 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 ARHGAP24Q8N264 748 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 TACO1Q9BSH4 297 aaKnown RBP17.43■□□□□ 0.38
PTPN11-201ENST00000351677 UBE2TQ9NPD8 197 aaPredicted RBP17.43■□□□□ 0.38
PTPN11-201ENST00000351677 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 CAPN9O14815 690 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 MFAP3LO75121 409 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 KIF11P52732 1056 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 SEPT14Q6ZU15 432 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 TMC4Q7Z404 712 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 CCDC170Q8IYT3 715 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 SH3BP5O60239 455 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 PHLDB2Q86SQ0 1253 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 FMR1NBQ8N0W7 255 aaPredicted RBP17.43■□□□□ 0.38
PTPN11-201ENST00000351677 ATP6V0A1Q93050 837 aa17.43■□□□□ 0.38
PTPN11-201ENST00000351677 TRIM49BA6NDI0 452 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 GIPC1O14908 333 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 MAPK4P31152 587 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 EPHB4P54760 987 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 CTTNQ14247 550 aaKnown RBP17.42■□□□□ 0.38
PTPN11-201ENST00000351677 SARM1Q6SZW1 724 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 DGKHQ86XP1 1220 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 CEP170P1Q96L14 293 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 HESX1Q9UBX0 185 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 MINPP1Q9UNW1 487 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 SYNJ2BP-COX16A0A087WUM0 186 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 POLR2BP30876 1174 aaKnown RBP17.42■□□□□ 0.38
PTPN11-201ENST00000351677 IFNAR2P48551 515 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 SLC7A5Q01650 507 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 FAM160B1Q5W0V3 765 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 DHX36Q9H2U1 1008 aaKnown RBP17.42■□□□□ 0.38
PTPN11-201ENST00000351677 COX16Q9P0S2 106 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 RNF8O76064 485 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 CACNB3P54284 484 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 SLC12A2P55011 1212 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 AFAP1L2Q8N4X5 818 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 KIF2CQ99661 725 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 POC1B-GALNT4F8VUJ3 575 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 SERPING1P05155 500 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 PRR29P0C7W0 189 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 ENAHQ8N8S7 591 aaPredicted RBP17.42■□□□□ 0.38
PTPN11-201ENST00000351677 ATP8A1Q9Y2Q0 1164 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 DAAM1Q9Y4D1 1078 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 ARHGAP31Q2M1Z3 1444 aa17.42■□□□□ 0.38
PTPN11-201ENST00000351677 SFI1A8K8P3 1242 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 USP17L5A8MUK1 530 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 PGRMC1O00264 195 aaKnown RBP17.41■□□□□ 0.38
PTPN11-201ENST00000351677 NOL3O60936 208 aaKnown RBP17.41■□□□□ 0.38
PTPN11-201ENST00000351677 PLTPP55058 493 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 IFRD2Q12894 506 aaPredicted RBP17.41■□□□□ 0.38
PTPN11-201ENST00000351677 PSMD2Q13200 908 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 TSNAXIP1Q2TAA8 658 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 ARHGAP27Q6ZUM4 889 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 PARVGQ9HBI0 331 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 JRKLQ9Y4A0 524 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 ZNF335Q9H4Z2 1342 aaPredicted RBP17.41■□□□□ 0.38
PTPN11-201ENST00000351677 RPAP1Q9BWH6 1393 aaPredicted RBP17.41■□□□□ 0.38
PTPN11-201ENST00000351677 MED14O60244 1454 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 DDIT3P35638 169 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 NRKQ7Z2Y5 1582 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 PNPLA6Q8IY17 1366 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 SARNPP82979 210 aaKnown RBP17.41■□□□□ 0.38
PTPN11-201ENST00000351677 APBA1Q02410 837 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 ADCY1Q08828 1119 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 SLC44A5Q8NCS7 719 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms