RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 NECTIN4Q96NY8 510 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 CDCA3Q99618 268 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 WDR11Q9BZH6 1224 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 GOPCQ9HD26 462 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 PARD6AQ9NPB6 346 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 ITPR1Q14643 2758 aa10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 CNOT1A5YKK6 2376 aaKnown RBP10.87□□□□□ -0.67
UBE2D3-205ENST00000350435 RBAK-RBAKDNI3L0D1 243 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 POLR3DP05423 398 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 ITGB1P05556 798 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 PTK7Q13308 1070 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 BTG3Q14201 252 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 GORABQ5T7V8 394 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 IL31Q6EBC2 164 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 CES5AQ6NT32 575 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 TRAF7Q6Q0C0 670 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 SIAH1Q8IUQ4 282 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 VN1R2Q8NFZ6 395 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 POMKQ9H5K3 350 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 RAVER2Q9HCJ3 691 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 HOMER2Q9NSB8 354 aa10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 DDX49Q9Y6V7 483 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-205ENST00000350435 IGF2RP11717 2491 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 A6NJR5 290 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 MMP3P08254 477 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 HOXB8P17481 243 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 EVX2Q03828 476 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 SPEM2Q0P670 501 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 TDGQ13569 410 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 DUSP6Q16828 381 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 ZNF528Q3MIS6 628 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 SYCE2Q6PIF2 218 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 PRPF38AQ8NAV1 312 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 HNRNPABQ99729 332 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 EPC1Q9H2F5 836 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 ACAD9Q9H845 621 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 DUSP12Q9UNI6 340 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 PCDHGA2Q9Y5H1 932 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 MIA3Q5JRA6 1907 aa10.85□□□□□ -0.67
UBE2D3-205ENST00000350435 RSPH10B2B2RC85 870 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 APAF1O14727 1248 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 TBC1D4O60343 1298 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 DCNP07585 359 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 RSPH10BP0C881 870 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 GABPAQ06546 454 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 TMEM184AQ6ZMB5 413 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 CERS3Q8IU89 383 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 NEUROD6Q96NK8 337 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 GTF2IRD1Q9UHL9 959 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 AKAP2Q9Y2D5 859 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 DMXL2Q8TDJ6 3036 aa10.84□□□□□ -0.67
UBE2D3-205ENST00000350435 NKRFO15226 690 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 TRIM71Q2Q1W2 868 aaKnown RBP10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 TPRNQ4KMQ1 711 aa10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 C7orf31Q8N865 590 aa10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 KLHL23Q8NBE8 558 aa10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 ADAM32Q8TC27 787 aa10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 ZCCHC14Q8WYQ9 949 aaKnown RBP10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 A1CFQ9NQ94 594 aaKnown RBP10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 SIT1Q9Y3P8 196 aa10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 PATJQ8NI35 1801 aa10.83□□□□□ -0.68
UBE2D3-205ENST00000350435 LCTP09848 1927 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 IGSF10Q6WRI0 2623 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 EEF2P13639 858 aaKnown RBP10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 MTHFRP42898 656 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 OAZ1P54368 228 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 PPP2R5BQ15173 497 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 LLGL2Q6P1M3 1020 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 TBC1D17Q9HA65 648 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 SLC38A10Q9HBR0 1119 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 CYP26B1Q9NR63 512 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 WNT16Q9UBV4 365 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 CDH22Q9UJ99 828 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 FBXO4Q9UKT5 387 aa10.82□□□□□ -0.68
UBE2D3-205ENST00000350435 POTEMA6NI47 508 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 LAMTOR5O43504 91 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 CFHP08603 1231 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 THPOP40225 353 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 ITIH3Q06033 890 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 PDE4BQ07343 736 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 RUFY4Q6ZNE9 571 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 MAML2Q8IZL2 1156 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 MIGA1Q8NAN2 632 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 APBB2Q92870 758 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 WNT8BQ93098 351 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 KIFC2Q96AC6 838 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 NUP88Q99567 741 aaPredicted RBP10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 RC3H2Q9HBD1 1191 aaKnown RBP10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 DLGAP2Q9P1A6 1054 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 HDAC6Q9UBN7 1215 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 DBR1Q9UK59 544 aaKnown RBP10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 RAB23Q9ULC3 237 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 USTQ9Y2C2 406 aa10.81□□□□□ -0.68
UBE2D3-205ENST00000350435 RBM47A0AV96 593 aaKnown RBP10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 KRBA1A5PL33 1030 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 LRP3O75074 770 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms