RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SPTLC1O15269 473 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 LARGE1O95461 756 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 CYP2C9P11712 490 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 ME1P48163 572 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 PPP2R2AP63151 447 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 KCNJ2P63252 427 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 SEPT6Q14141 434 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 PAPD7Q5XG87 772 aaKnown RBP9.37□□□□□ -0.91
TDP1-201ENST00000335725 SPATA24Q86W54 205 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 TSEN2Q8NCE0 465 aaKnown RBP9.37□□□□□ -0.91
TDP1-201ENST00000335725 SUN5Q8TC36 379 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 RAPGEF5Q92565 580 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 PRPF18Q99633 342 aaKnown RBP9.37□□□□□ -0.91
TDP1-201ENST00000335725 GBA3Q9H227 469 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 DHX36Q9H2U1 1008 aaKnown RBP9.37□□□□□ -0.91
TDP1-201ENST00000335725 SAMSN1Q9NSI8 373 aaKnown RBP9.37□□□□□ -0.91
TDP1-201ENST00000335725 HEY1Q9Y5J3 304 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 A0A087WWV3 80 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 SCG2P13521 617 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 CCNFP41002 786 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 RGS2P41220 211 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 NCALDP61601 193 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 CPSF1Q10570 1443 aaKnown RBP9.37□□□□□ -0.91
TDP1-201ENST00000335725 RESTQ13127 1097 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 IQGAP2Q13576 1575 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 ITGA9Q13797 1035 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 PALB2Q86YC2 1186 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 ASAP3Q8TDY4 903 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 CENPTQ96BT3 561 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 TRPC7Q9HCX4 862 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
TDP1-201ENST00000335725 EFCAB6Q5THR3 1501 aa9.37□□□□□ -0.91
TDP1-201ENST00000335725 A0A1W2PQ27 194 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 A0A1W2PQ64 194 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 A0A1W2PQD8 194 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 LDHBP07195 334 aaKnown RBP9.36□□□□□ -0.91
TDP1-201ENST00000335725 TKTP29401 623 aaKnown RBP9.36□□□□□ -0.91
TDP1-201ENST00000335725 COPS2P61201 443 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 VPS36Q86VN1 386 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 IFT20Q8IY31 132 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 ANKRD36BP1Q96IX9 119 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 PLEKHF1Q96S99 279 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.36□□□□□ -0.91
TDP1-201ENST00000335725 CYP39A1Q9NYL5 469 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 PTTG2Q9NZH5 202 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 CCPG1Q9ULG6 757 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 SMIM31A0A1B0GVY4 71 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 ZNF233A6NK53 670 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 FAM25EA8MYX2 175 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 TNFRSF10AO00220 468 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 SERPINB7O75635 380 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 VAV1P15498 845 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 KRT4P19013 534 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 HSPA9P38646 679 aaKnown RBP9.36□□□□□ -0.91
TDP1-201ENST00000335725 VHLP40337 213 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 SH3D19Q5HYK7 790 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 LARP1Q6PKG0 1096 aaKnown RBP9.36□□□□□ -0.91
TDP1-201ENST00000335725 ARHGAP27Q6ZUM4 889 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 TAOK1Q7L7X3 1001 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 CCNJLQ8IV13 435 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 CNGA4Q8IV77 575 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 FMR1NBQ8N0W7 255 aaPredicted RBP9.36□□□□□ -0.91
TDP1-201ENST00000335725 PPFIBP2Q8ND30 876 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.36□□□□□ -0.918e-7■■■■■ 32.1
TDP1-201ENST00000335725 TMBIM4Q9HC24 238 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 SLC12A6Q9UHW9 1150 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 PLAAQ9Y263 795 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 GIT1Q9Y2X7 761 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 OXSR1O95747 527 aaPredicted RBP9.36□□□□□ -0.91
TDP1-201ENST00000335725 CCNCP24863 283 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 MXI1P50539 228 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 APLP1P51693 650 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 MTF1Q14872 753 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 RAD9BQ6WBX8 426 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 CAPN12Q6ZSI9 719 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 ST13P4Q8IZP2 240 aaPredicted RBP9.36□□□□□ -0.91
TDP1-201ENST00000335725 FAM133AQ8N9E0 248 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 VPS50Q96JG6 964 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 HAUS4Q9H6D7 363 aa9.36□□□□□ -0.91
TDP1-201ENST00000335725 SEC63Q9UGP8 760 aaKnown RBP9.36□□□□□ -0.91
TDP1-201ENST00000335725 APBB1O00213 710 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 TFRCP02786 760 aaKnown RBP9.35□□□□□ -0.91
TDP1-201ENST00000335725 TRIM71Q2Q1W2 868 aaKnown RBP9.35□□□□□ -0.91
TDP1-201ENST00000335725 MRPL50Q8N5N7 158 aaKnown RBP9.35□□□□□ -0.91
TDP1-201ENST00000335725 ENDOVQ8N8Q3 282 aaKnown RBP9.35□□□□□ -0.91
TDP1-201ENST00000335725 FBXO41Q8TF61 875 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 NAT14Q8WUY8 206 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 HGH1Q9BTY7 390 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 STIM2Q9P246 746 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 RPL26L1Q9UNX3 145 aaKnown RBP9.35□□□□□ -0.91
TDP1-201ENST00000335725 ABCC12Q96J65 1359 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 JCADQ9P266 1359 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 ANO9A1A5B4 782 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 FBXO21O94952 628 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 KRT16P08779 473 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 TPBGLP0DKB5 382 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 CCDC14Q49A88 953 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 WDR45BQ5MNZ6 344 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 AGBL2Q5U5Z8 902 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 GOLM1Q8NBJ4 401 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms