RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 ATP2C1P98194 919 aaPredicted RBP9.2□□□□□ -0.94
SKA2-201ENST00000330137 PPARAQ07869 468 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 CCDC15Q0P6D6 951 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 BNIP1Q12981 228 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 MTA1Q13330 715 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 PPP2R5EQ16537 467 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 ATG9AQ7Z3C6 839 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 USP38Q8NB14 1042 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 ACTRT1Q8TDG2 376 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 MMTAG2Q9BU76 263 aaKnown RBP9.2□□□□□ -0.94
SKA2-201ENST00000330137 RNF26Q9BY78 433 aaPredicted RBP9.2□□□□□ -0.94
SKA2-201ENST00000330137 LGR6Q9HBX8 967 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 AGPAT5Q9NUQ2 364 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 PNPLA7Q6ZV29 1317 aa9.2□□□□□ -0.94
SKA2-201ENST00000330137 RGL2O15211 777 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 RNF8O76064 485 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 NUDT17P0C025 328 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 GNAT1P11488 350 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 ATP6V1C1P21283 382 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 ECHS1P30084 290 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 PRCPP42785 496 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 MATR3P43243 847 aaKnown RBP eCLIP9.19□□□□□ -0.94
SKA2-201ENST00000330137 MAGEA1P43355 309 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 PDE6CP51160 858 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 CASP7P55210 303 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 UAP1Q16222 522 aaPredicted RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 PARP6Q2NL67 630 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 LRRC23Q53EV4 343 aaPredicted RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 MEI1Q5TIA1 1274 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 USP49Q70CQ1 688 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 CRACR2BQ8N4Y2 399 aaPredicted RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 FAM192AQ9GZU8 254 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 SLITRK6Q9H5Y7 841 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 FAM114A2Q9NRY5 505 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.19□□□□□ -0.94
SKA2-201ENST00000330137 SART1O43290 800 aaKnown RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 KCNQ3O43525 872 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 RHOBTB3O94955 611 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 OAS1P00973 400 aaKnown RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 PENKP01210 267 aaPredicted RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 A1BGP04217 495 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 LONP1P36776 959 aaKnown RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 PSMC4P43686 418 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 GUCY2FP51841 1108 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 COPS2P61201 443 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 NCALDP61601 193 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 PSMD2Q13200 908 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 TAF11Q15544 211 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 ASTE1Q2TB18 679 aaPredicted RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 C10orf76Q5T2E6 689 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 NFXL1Q6ZNB6 911 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 CYB5R4Q7L1T6 521 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 ASRGL1Q7L266 308 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 NCAPG2Q86XI2 1143 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 SMYD4Q8IYR2 804 aaPredicted RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 ARHGAP18Q8N392 663 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 B4GALNT2Q8NHY0 566 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 SCFD2Q8WU76 684 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 RBM41Q96IZ5 413 aaKnown RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 EPSTI1Q96J88 318 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 ZNF512BQ96KM6 892 aaPredicted RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 TMEM109Q9BVC6 243 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 CUEDC2Q9H467 287 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 SUDS3Q9H7L9 328 aaPredicted RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 CNOT8Q9UFF9 292 aaKnown RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 NOVA2Q9UNW9 492 aaKnown RBP9.19□□□□□ -0.94
SKA2-201ENST00000330137 L3MBTL1Q9Y468 752 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 PXDNQ92626 1479 aa9.19□□□□□ -0.94
SKA2-201ENST00000330137 CTNND1O60716 968 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 HIP1RO75146 1068 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 RARAP10276 462 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 GNAZP19086 355 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 TMOD1P28289 359 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 ABL2P42684 1182 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 MSH2P43246 934 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 HAND2P61296 217 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 TTI2Q6NXR4 508 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 TBC1D1Q86TI0 1168 aaPredicted RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 MICU3Q86XE3 530 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 GIMAP8Q8ND71 665 aaPredicted RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 TEKT4Q8WW24 435 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 ATXN2LQ8WWM7 1075 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 LTV1Q96GA3 475 aaPredicted RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 NGLY1Q96IV0 654 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 TRIM7Q9C029 511 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 INCENPQ9NQS7 918 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 CTTNBP2NLQ9P2B4 639 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 CCDC169A6NNP5 214 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 PHF20L1A8MW92 1017 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 GPAA1O43292 621 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 LMNAP02545 664 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 CCNB1P14635 433 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 IBSPP21815 317 aaPredicted RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 KRT2P35908 639 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 ALDH5A1P51649 535 aaPredicted RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 MAGOHP61326 146 aaKnown RBP9.18□□□□□ -0.94
SKA2-201ENST00000330137 MXRA7P84157 204 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 NAB2Q15742 525 aa9.18□□□□□ -0.94
SKA2-201ENST00000330137 RTN1Q16799 776 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms