RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 RBL2Q08999 1139 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 MFSD10Q14728 455 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 SMARCC2Q8TAQ2 1214 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 SPATA33Q96N06 139 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 GAS2L1Q99501 681 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 SLC28A3Q9HAS3 691 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 SLC12A7Q9Y666 1083 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 SCN5AQ14524 2016 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 HAS3O00219 553 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 UBA1P22314 1058 aaKnown RBP19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 ICAM3P32942 547 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 PBX2P40425 430 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 GDF6Q6KF10 455 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 DEFB128Q7Z7B8 93 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 SGMS1Q86VZ5 419 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 IL31RAQ8NI17 732 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 PHOSPHO2Q8TCD6 241 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 VWCEQ96DN2 955 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 INPP4AQ96PE3 977 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 SLC9A7Q96T83 725 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 MYL10Q9BUA6 226 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 MLXIPQ9HAP2 919 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 PCDHA11Q9Y5I1 949 aa19.22■□□□□ 0.67
TRAPPC1-201ENST00000303731 BAIAP3O94812 1187 aa19.21■□□□□ 0.67
TRAPPC1-201ENST00000303731 ATP2A2P16615 1042 aaKnown RBP19.21■□□□□ 0.67
TRAPPC1-201ENST00000303731 NEDD9Q14511 834 aa19.21■□□□□ 0.67
TRAPPC1-201ENST00000303731 KIAA0753Q2KHM9 967 aa19.21■□□□□ 0.67
TRAPPC1-201ENST00000303731 SYNE3Q6ZMZ3 975 aa19.21■□□□□ 0.67
TRAPPC1-201ENST00000303731 PIBF1Q8WXW3 757 aa19.21■□□□□ 0.67
TRAPPC1-201ENST00000303731 FIBPO43427 364 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 ZNF286BP0CG31 522 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 SELPP16109 830 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 PTK7Q13308 1070 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 HSDL1Q3SXM5 330 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 PCNX4Q63HM2 1172 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 METTL7BQ6UX53 244 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 TEX2Q8IWB9 1127 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 FANCBQ8NB91 859 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 ALG1Q9BT22 464 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 FTOQ9C0B1 505 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 HDAC6Q9UBN7 1215 aa19.2■□□□□ 0.66
TRAPPC1-201ENST00000303731 NOP56O00567 594 aaKnown RBP19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 CDC45O75419 566 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 PLEKHA8P1O95397 391 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 MRPS9P82933 396 aaKnown RBP19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 SP2Q02086 613 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 KRT32Q14532 448 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 LRRC8DQ7L1W4 858 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 SRBD1Q8N5C6 995 aaKnown RBP19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 GIMAP8Q8ND71 665 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 PPP1R13LQ8WUF5 828 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 CDHR1Q96JP9 859 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 NEK1Q96PY6 1258 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 CTAGE1Q96RT6 745 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 USP26Q9BXU7 913 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 NKX2-4Q9H2Z4 354 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 RBM28Q9NW13 759 aaKnown RBP19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 CHD9Q3L8U1 2897 aa19.19■□□□□ 0.66
TRAPPC1-201ENST00000303731 PRUNE2Q8WUY3 3088 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 SPATA31C2B4DYI2 1134 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 MEIS2O14770 477 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 TSGA10IPQ3SY00 556 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 PPP2R2DQ66LE6 453 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 TMTC3Q6ZXV5 915 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 NLRX1Q86UT6 975 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 SENP7Q9BQF6 1050 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 PSTPIP2Q9H939 334 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 YBX2Q9Y2T7 364 aaKnown RBP19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 TET1Q8NFU7 2136 aa19.18■□□□□ 0.66
TRAPPC1-201ENST00000303731 KIF28PB7ZC32 967 aa19.17■□□□□ 0.66
TRAPPC1-201ENST00000303731 HMGB1P09429 215 aaKnown RBP19.17■□□□□ 0.66
TRAPPC1-201ENST00000303731 CKBP12277 381 aa19.17■□□□□ 0.66
TRAPPC1-201ENST00000303731 USP17L6PQ6QN14 398 aa19.17■□□□□ 0.66
TRAPPC1-201ENST00000303731 C16orf70Q9BSU1 422 aa19.17■□□□□ 0.66
TRAPPC1-201ENST00000303731 PRDM12Q9H4Q4 367 aa19.17■□□□□ 0.66
TRAPPC1-201ENST00000303731 H3BRB1 525 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 EFCAB14O75071 495 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 CXCL10P02778 98 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 LGALS2P05162 132 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 RXRAP19793 462 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 KCNJ6P48051 423 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 CNKSR3Q6P9H4 555 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 DHX32Q7L7V1 743 aaKnown RBP19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 MICU3Q86XE3 530 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 DHX38Q92620 1227 aaKnown RBP19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 GPRASP2Q96D09 838 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 TUT1Q9H6E5 874 aaKnown RBP19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 EHMT1Q9H9B1 1298 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 ZNF215Q9UL58 517 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 EMSYQ7Z589 1322 aa19.16■□□□□ 0.66
TRAPPC1-201ENST00000303731 SPDYE3A6NKU9 549 aa19.15■□□□□ 0.66
TRAPPC1-201ENST00000303731 hCG_1984214I3L0E3 225 aa19.15■□□□□ 0.66
TRAPPC1-201ENST00000303731 GNAT1P11488 350 aa19.15■□□□□ 0.66
TRAPPC1-201ENST00000303731 RABGGTBP53611 331 aa19.15■□□□□ 0.66
TRAPPC1-201ENST00000303731 RCAN1P53805 252 aa19.15■□□□□ 0.66
TRAPPC1-201ENST00000303731 APOA5Q6Q788 366 aa19.15■□□□□ 0.66
TRAPPC1-201ENST00000303731 CYFIP1Q7L576 1253 aa19.15■□□□□ 0.66
TRAPPC1-201ENST00000303731 ZNF713Q8N859 430 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC1-201ENST00000303731 GPKOWQ92917 476 aaPredicted RBP eCLIP19.15■□□□□ 0.66
TRAPPC1-201ENST00000303731 LRRC2Q9BYS8 371 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms