RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 KRT81Q14533 505 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 DCP1AQ9NPI6 582 aaPredicted RBP17.85■□□□□ 0.45
BRD3-201ENST00000303407 NRBP2Q9NSY0 501 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 VPS41P49754 854 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 FAM160B1Q5W0V3 765 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 CASC4Q6P4E1 433 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 NDST4Q9H3R1 872 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 NRXN1Q9ULB1 1477 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 HNRNPDLO14979 420 aaKnown RBP17.85■□□□□ 0.45
BRD3-201ENST00000303407 SERPING1P05155 500 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 HOXA13P31271 388 aaPredicted RBP17.85■□□□□ 0.45
BRD3-201ENST00000303407 NSFP46459 744 aaKnown RBP17.85■□□□□ 0.45
BRD3-201ENST00000303407 YARSP54577 528 aaKnown RBP17.85■□□□□ 0.45
BRD3-201ENST00000303407 MESDQ14696 234 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 AOC3Q16853 763 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 RSRC1Q96IZ7 334 aaKnown RBP17.85■□□□□ 0.45
BRD3-201ENST00000303407 NT5C1BQ96P26 610 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 ANO3Q9BYT9 981 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 EXOSC10Q01780 885 aaKnown RBP17.85■□□□□ 0.45
BRD3-201ENST00000303407 HADHQ16836 314 aaKnown RBP17.85■□□□□ 0.45
BRD3-201ENST00000303407 LGSNQ5TDP6 509 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 VSIG1Q86XK7 387 aa17.85■□□□□ 0.45
BRD3-201ENST00000303407 CXCR5P32302 372 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 P3H4Q92791 437 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 FTCDO95954 541 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 IFNB1P01574 187 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 PPM1FP49593 454 aaPredicted RBP17.84■□□□□ 0.45
BRD3-201ENST00000303407 LRRC63Q05C16 580 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 CCDC13Q8IYE1 715 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 KIDINS220Q9ULH0 1771 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 GFPT2O94808 682 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 ATF2P15336 505 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 STX2P32856 288 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 PALM2Q8IXS6 379 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 RAB3IL1Q8TBN0 382 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 HOXA7P31268 230 aaPredicted RBP17.84■□□□□ 0.45
BRD3-201ENST00000303407 CCDC110Q8TBZ0 833 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 MMS19Q96T76 1030 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 PARD6BQ9BYG5 372 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 KMT5AQ9NQR1 393 aa17.84■□□□□ 0.45
BRD3-201ENST00000303407 USP14P54578 494 aa17.83■□□□□ 0.45
BRD3-201ENST00000303407 EAPPQ56P03 285 aaPredicted RBP17.83■□□□□ 0.45
BRD3-201ENST00000303407 ATP6V0A1Q93050 837 aa17.83■□□□□ 0.45
BRD3-201ENST00000303407 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.45
BRD3-201ENST00000303407 TRIM49BA6NDI0 452 aa17.83■□□□□ 0.45
BRD3-201ENST00000303407 M0QZ92 97 aa17.83■□□□□ 0.45
BRD3-201ENST00000303407 TMEM191BP0C7N4 346 aa17.83■□□□□ 0.45
BRD3-201ENST00000303407 KIF11P52732 1056 aa17.83■□□□□ 0.45
BRD3-201ENST00000303407 GRM4Q14833 912 aa17.83■□□□□ 0.45
BRD3-201ENST00000303407 UHMK1Q8TAS1 419 aaKnown RBP17.83■□□□□ 0.45
BRD3-201ENST00000303407 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.45
BRD3-201ENST00000303407 I3L4J1 428 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 LRRN2O75325 713 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 CCND2P30279 289 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 HSPA1LP34931 641 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 PPP2R5DQ14738 602 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 SCYL2Q6P3W7 929 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 TMEM206Q9H813 350 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 USP32Q8NFA0 1604 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 APBA1Q02410 837 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 PTK2Q05397 1052 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 GKAP1Q5VSY0 366 aaPredicted RBP17.83■□□□□ 0.44
BRD3-201ENST00000303407 TTC19Q6DKK2 380 aaPredicted RBP17.83■□□□□ 0.44
BRD3-201ENST00000303407 CPVLQ9H3G5 476 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 PCDHB4Q9Y5E5 795 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 PASKQ96RG2 1323 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 OVOS2A0A0G2JMS6 1433 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 THAP12O43422 761 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 CTTNQ14247 550 aaKnown RBP17.83■□□□□ 0.44
BRD3-201ENST00000303407 CCDC144BQ3MJ40 725 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 KAZNQ674X7 775 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 TMED8Q6PL24 325 aaPredicted RBP17.83■□□□□ 0.44
BRD3-201ENST00000303407 PPFIBP2Q8ND30 876 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 DCAF4Q8WV16 495 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 PLA2G12BQ9BX93 195 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 EPB41L5Q9HCM4 733 aa17.83■□□□□ 0.44
BRD3-201ENST00000303407 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 ITSN1Q15811 1721 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 RAD17O75943 681 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 CLCN6P51797 869 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 EPHB4P54760 987 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 MTA3Q9BTC8 594 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 PARVGQ9HBI0 331 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 ANAPC4Q9UJX5 808 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 HEXIM1O94992 359 aaKnown RBP17.82■□□□□ 0.44
BRD3-201ENST00000303407 GBP1P32455 592 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 SEPT12Q8IYM1 358 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.82■□□□□ 0.44
BRD3-201ENST00000303407 TYW1Q9NV66 732 aaKnown RBP17.82■□□□□ 0.44
BRD3-201ENST00000303407 MIS18BP1Q6P0N0 1132 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 MIGA2Q7L4E1 593 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 FRMPD1Q5SYB0 1578 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 MROH7-TTC4A0A0A0MT08 1334 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 BUB1BO60566 1050 aaPredicted RBP17.82■□□□□ 0.44
BRD3-201ENST00000303407 PHBP35232 272 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 SLC44A5Q8NCS7 719 aa17.82■□□□□ 0.44
BRD3-201ENST00000303407 CYP27A1Q02318 531 aa17.81■□□□□ 0.44
BRD3-201ENST00000303407 CCDC62Q6P9F0 684 aa17.81■□□□□ 0.44
BRD3-201ENST00000303407 SHC4Q6S5L8 630 aa17.81■□□□□ 0.44
BRD3-201ENST00000303407 RUNDC3BQ96NL0 473 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms