RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ARMC2Q8NEN0 867 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 TRIM11Q96F44 468 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 DOLKQ9UPQ8 538 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 ANP32DO95626 131 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 ZSCAN20P17040 1043 aaPredicted RBP13.04□□□□□ -0.32
PCF11-201ENST00000298281 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 VPS54Q9P1Q0 977 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 ADAT2Q7Z6V5 191 aaKnown RBP13.04□□□□□ -0.32
PCF11-201ENST00000298281 RAPGEF5Q92565 580 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 DCPSQ96C86 337 aaKnown RBP13.04□□□□□ -0.32
PCF11-201ENST00000298281 C6orf203Q9P0P8 240 aaPredicted RBP13.04□□□□□ -0.32
PCF11-201ENST00000298281 ARHGEF37A1IGU5 675 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 PPIP5K2O43314 1243 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 RBM6P78332 1123 aaKnown RBP13.04□□□□□ -0.32
PCF11-201ENST00000298281 KRT24Q2M2I5 525 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 CCNYQ8ND76 341 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 SNX25Q9H3E2 840 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 NRBP2Q9NSY0 501 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 USP40Q9NVE5 1235 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.04□□□□□ -0.32
PCF11-201ENST00000298281 TMEM191BP0C7N4 346 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 DLATP10515 647 aaKnown RBP13.03□□□□□ -0.32
PCF11-201ENST00000298281 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 ANXA13P27216 316 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 POLGP54098 1239 aaPredicted RBP13.03□□□□□ -0.32
PCF11-201ENST00000298281 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 MRPL28Q13084 256 aaKnown RBP13.03□□□□□ -0.32
PCF11-201ENST00000298281 FAM160B1Q5W0V3 765 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 TRIM67Q6ZTA4 783 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 EXT2Q93063 718 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 TEKT3Q9BXF9 490 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 FRMD3A2A2Y4 597 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 PRPF4O43172 522 aaKnown RBP eCLIP13.03□□□□□ -0.322e-8■■□□□ 14.2
PCF11-201ENST00000298281 UBE3AQ05086 875 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 NAF1Q96HR8 494 aaKnown RBP13.03□□□□□ -0.32
PCF11-201ENST00000298281 PAPOLBQ9NRJ5 636 aaKnown RBP13.03□□□□□ -0.32
PCF11-201ENST00000298281 LAD1O00515 517 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 E2F6O75461 281 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 OR52Z1P0C646 297 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 E4F1Q66K89 784 aaPredicted RBP13.03□□□□□ -0.32
PCF11-201ENST00000298281 POC1B-GALNT4F8VUJ3 575 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 KCNK3O14649 394 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 TTC19Q6DKK2 380 aaPredicted RBP13.03□□□□□ -0.32
PCF11-201ENST00000298281 LRRC8CQ8TDW0 803 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 PASKQ96RG2 1323 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 IGSF3O75054 1194 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 CLTAP09496 248 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 RECQLP46063 649 aaPredicted RBP13.03□□□□□ -0.32
PCF11-201ENST00000298281 GUCY2FP51841 1108 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 DRP2Q13474 957 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 MORC3Q14149 939 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 FSCBQ5H9T9 825 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 KLC3Q6P597 504 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 RNF139Q8WU17 664 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 ZSCAN10Q96SZ4 725 aaPredicted RBP13.03□□□□□ -0.32
PCF11-201ENST00000298281 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 ARL4DP49703 201 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 KRT77Q7Z794 578 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
PCF11-201ENST00000298281 H2AFZP0C0S5 128 aa13.02□□□□□ -0.32
PCF11-201ENST00000298281 ZAP70P43403 619 aa13.02□□□□□ -0.32
PCF11-201ENST00000298281 H2AFVQ71UI9 128 aa13.02□□□□□ -0.32
PCF11-201ENST00000298281 TFDP1Q14186 410 aa13.02□□□□□ -0.32
PCF11-201ENST00000298281 XKR9Q5GH70 373 aa13.02□□□□□ -0.32
PCF11-201ENST00000298281 RRM2BQ7LG56 351 aa13.02□□□□□ -0.32
PCF11-201ENST00000298281 PANK4Q9NVE7 773 aa13.02□□□□□ -0.32
PCF11-201ENST00000298281 PRR23D1E9PI22 279 aaPredicted RBP13.02□□□□□ -0.33
PCF11-201ENST00000298281 TAF5LO75529 589 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 PRR23D2P0DMB1 279 aaPredicted RBP13.02□□□□□ -0.33
PCF11-201ENST00000298281 FBXO11Q86XK2 927 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 ZNF594Q96JF6 807 aaPredicted RBP13.02□□□□□ -0.33
PCF11-201ENST00000298281 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 TRPC5Q9UL62 973 aaPredicted RBP13.02□□□□□ -0.33
PCF11-201ENST00000298281 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
PCF11-201ENST00000298281 GUCA1CO95843 209 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 HSPA1AP0DMV8 641 aaKnown RBP13.02□□□□□ -0.33
PCF11-201ENST00000298281 HSPA1BP0DMV9 641 aaKnown RBP13.02□□□□□ -0.33
PCF11-201ENST00000298281 CTSWP56202 376 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 LVRNQ6Q4G3 990 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 GIPC2Q8TF65 315 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 MKL2Q9ULH7 1088 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 IQANK1A0A1B0GTG1 560 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 TBC1D12O60347 775 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 PTK2Q05397 1052 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 PDCD6IPQ8WUM4 868 aaKnown RBP13.02□□□□□ -0.33
PCF11-201ENST00000298281 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCF11-201ENST00000298281 FTOQ9C0B1 505 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCF11-201ENST00000298281 ERBB4Q15303 1308 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 K7ENM7 598 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 IMPDH2P12268 514 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 DONSONQ9NYP3 566 aa13.02□□□□□ -0.33
PCF11-201ENST00000298281 STRIP2Q9ULQ0 834 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms