RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 INPP5BP32019 993 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 SH2D4BQ5SQS7 431 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 PCDHA5Q9Y5H7 936 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 EPN1Q9Y6I3 576 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-201ENST00000293441 DDIT3P35638 169 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 ZNF653Q96CK0 615 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 TMEM206Q9H813 350 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 NOC2LQ9Y3T9 749 aaKnown RBP18.81■□□□□ 0.6
SHANK1-201ENST00000293441 A6NNZ2 444 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 hCG_1984214I3L0E3 225 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 TXNDC9O14530 226 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 MAPK4P31152 587 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 TUBB8Q3ZCM7 444 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 ZNF713Q8N859 430 aaPredicted RBP18.81■□□□□ 0.6
SHANK1-201ENST00000293441 NLRP4Q96MN2 994 aa18.81■□□□□ 0.6
SHANK1-201ENST00000293441 ZCCHC11Q5TAX3 1644 aaKnown RBP18.81■□□□□ 0.6
SHANK1-201ENST00000293441 CASP14P31944 242 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 TTC37Q6PGP7 1564 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 CRKP46108 304 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 PPP2R5EQ16537 467 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 GPT2Q8TD30 523 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 RNF40O75150 1001 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 GARSP41250 739 aaKnown RBP18.8■□□□□ 0.6
SHANK1-201ENST00000293441 BRINP3Q76B58 766 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 PHLDB2Q86SQ0 1253 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 PNMA6FA0A0J9YX94 578 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 LRRC8AQ8IWT6 810 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 TTLL11Q8NHH1 800 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 TSC1Q92574 1164 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 SMYD2Q9NRG4 433 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 GH2P01242 217 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 DCLK2Q8N568 766 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 DHTKD1Q96HY7 919 aaPredicted RBP18.8■□□□□ 0.6
SHANK1-201ENST00000293441 GSDMAQ96QA5 445 aa18.8■□□□□ 0.6
SHANK1-201ENST00000293441 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.8■□□□□ 0.6
SHANK1-201ENST00000293441 CTTNQ14247 550 aaKnown RBP18.79■□□□□ 0.6
SHANK1-201ENST00000293441 PTPN21Q16825 1174 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 PNMA3Q9UL41 463 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 BZW2Q9Y6E2 419 aaKnown RBP18.79■□□□□ 0.6
SHANK1-201ENST00000293441 TTC36A6NLP5 189 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 YWHAGP61981 247 aaKnown RBP eCLIP18.79■□□□□ 0.6
SHANK1-201ENST00000293441 RNF207Q6ZRF8 634 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 BBS5Q8N3I7 341 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 CCNYQ8ND76 341 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 UBE2TQ9NPD8 197 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-201ENST00000293441 ZNF658Q5TYW1 1059 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-201ENST00000293441 SCARA5Q6ZMJ2 495 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 RAPH1Q70E73 1250 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 MYRIPQ8NFW9 859 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 RPS6KA4O75676 772 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 CD58P19256 250 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 GOLGA8FQ08AF8 430 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 GOLGA8DPQ0D2H9 430 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 VCXQ9H320 206 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 SNX1Q13596 522 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 PNMA8AQ86V59 439 aaPredicted RBP18.79■□□□□ 0.6
SHANK1-201ENST00000293441 EFCC1Q9HA90 598 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 AFF2P51816 1311 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 TCP1P17987 556 aaKnown RBP18.79■□□□□ 0.6
SHANK1-201ENST00000293441 PPP1R12CQ9BZL4 782 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 SLC12A6Q9UHW9 1150 aa18.79■□□□□ 0.6
SHANK1-201ENST00000293441 CPSF3Q9UKF6 684 aaKnown RBP18.79■□□□□ 0.6
SHANK1-201ENST00000293441 PLA2G4BP0C869 781 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 STK38LQ9Y2H1 464 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 PASKQ96RG2 1323 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 CCDC170Q8IYT3 715 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 C2orf69Q8N8R5 385 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 HAUS4Q9H6D7 363 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 PARVGQ9HBI0 331 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 GCNT4Q9P109 453 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 PRPF3O43395 683 aaKnown RBP18.78■□□□□ 0.6
SHANK1-201ENST00000293441 MYO1EQ12965 1108 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 MAN1B1Q9UKM7 699 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 GOLGA8CPA6NN73 597 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 MED7O43513 233 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 S100BP04271 92 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-201ENST00000293441 FOXP4Q8IVH2 680 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-201ENST00000293441 HDAC11Q96DB2 347 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 FTOQ9C0B1 505 aaKnown RBP eCLIP18.78■□□□□ 0.6
SHANK1-201ENST00000293441 FAM49AQ9H0Q0 323 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-201ENST00000293441 WDR46O15213 610 aaKnown RBP18.78■□□□□ 0.6
SHANK1-201ENST00000293441 DYNLT1P63172 113 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 KIF23Q02241 960 aaPredicted RBP18.78■□□□□ 0.6
SHANK1-201ENST00000293441 PARD3BQ8TEW8 1205 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 CDKL2Q92772 493 aa18.78■□□□□ 0.6
SHANK1-201ENST00000293441 A0A1W2PQ27 194 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 A0A1W2PQ64 194 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 A0A1W2PQD8 194 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 GFPT2O94808 682 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 RPF1Q9H9Y2 349 aaKnown RBP18.77■□□□□ 0.6
SHANK1-201ENST00000293441 LRRC4Q9HBW1 653 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 STK17AQ9UEE5 414 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 ZBTB7AO95365 584 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 POLR3EQ9NVU0 708 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 POC1B-GALNT4F8VUJ3 575 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 CASQ2O14958 399 aaPredicted RBP18.77■□□□□ 0.6
SHANK1-201ENST00000293441 ECE2O60344 883 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 SRGAP2BP0DMP2 458 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 PLCG1P19174 1290 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 RBL2Q08999 1139 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms