RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 KIAA1024Q9UPX6 916 aa22.14■■□□□ 1.13
SCUBE1-201ENST00000290460 ATF5Q9Y2D1 282 aaPredicted RBP22.14■■□□□ 1.13
SCUBE1-201ENST00000290460 NRXN2Q9P2S2 1712 aa22.14■■□□□ 1.13
SCUBE1-201ENST00000290460 EIF4A3P38919 411 aaKnown RBP22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 CRKP46108 304 aa22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 KIAA0825Q8IV33 1275 aa22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 MYOCDQ8IZQ8 938 aa22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 IFIH1Q9BYX4 1025 aaKnown RBP22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 TRPC5Q9UL62 973 aaPredicted RBP22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 POTEB3A0JP26 581 aa22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 POTECB2RU33 542 aa22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 EEF2P13639 858 aaKnown RBP22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 HNRNPH3P31942 346 aaKnown RBP22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 KIF11P52732 1056 aa22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 POTEBQ6S5H4 581 aa22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 SECISBP2LQ93073 1101 aaKnown RBP22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 JADE2Q9NQC1 790 aa22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 PCDHA1Q9Y5I3 950 aa22.13■■□□□ 1.13
SCUBE1-201ENST00000290460 DDTLA6NHG4 134 aaPredicted RBP22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 FGFR1OPO95684 399 aaKnown RBP22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 HSPA1LP34931 641 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 STAT3P40763 770 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 SNAP25P60880 206 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 FAM193AP78312 1265 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 PSMD2Q13200 908 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 TSG101Q99816 390 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 LRRC27Q9C0I9 530 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 MLXIPQ9HAP2 919 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 CAPN6Q9Y6Q1 641 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 C10orf71Q711Q0 1435 aa22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 COL11A2P13942 1736 aaPredicted RBP22.12■■□□□ 1.13
SCUBE1-201ENST00000290460 PDE2AO00408 941 aaPredicted RBP22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 TRAF5O00463 557 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 N4BP1O75113 896 aaKnown RBP22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 SLC1A4P43007 532 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 ZCWPW2Q504Y3 356 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 FAM26FQ5R3K3 315 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 CCDC84Q86UT8 332 aaPredicted RBP22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 NELFCDQ8IXH7 590 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 DRC1Q96MC2 740 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 DEF6Q9H4E7 631 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 KANSL2Q9H9L4 492 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 PCDHA13Q9Y5I0 950 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 NPR1P16066 1061 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 GCFC2P16383 781 aaKnown RBP22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 USP14P54578 494 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 CASP8Q14790 479 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 NEK11Q8NG66 645 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 BAP1Q92560 729 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 ABCB11O95342 1321 aa22.11■■□□□ 1.13
SCUBE1-201ENST00000290460 KCNMA1Q12791 1236 aa22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 CDC37Q16543 378 aaPredicted RBP22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 ANO3Q9BYT9 981 aa22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 SCN9AQ15858 1988 aa22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 BRWD3Q6RI45 1802 aa22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 AKR1B10O60218 316 aa22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 WDR93Q6P2C0 686 aa22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 CAGE1Q8TC20 777 aa22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 IQCDQ96DY2 449 aa22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 P2RX7Q99572 595 aaKnown RBP22.1■■□□□ 1.13
SCUBE1-201ENST00000290460 ZMYND10O75800 440 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 MOCS3O95396 460 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 PLA2G4BP0C869 781 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 TAL1P17542 331 aaPredicted RBP22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 RBM5P52756 815 aaKnown RBP eCLIP22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 CCDC40Q4G0X9 1142 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 SLFN13Q68D06 897 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 GPBP1Q86WP2 473 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 EHD4Q9H223 541 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 SH2D4AQ9H788 454 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 NLRC4Q9NPP4 1024 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 COL4A3BPQ9Y5P4 624 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 SMCHD1A6NHR9 2005 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 ANO9A1A5B4 782 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 LRRIQ3A6PVS8 624 aaPredicted RBP22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 FKBP3Q00688 224 aaKnown RBP22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 APBA1Q02410 837 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 SEPT2Q15019 361 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 CERKLQ49MI3 558 aaPredicted RBP22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 HYIQ5T013 277 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 CACNA2D4Q7Z3S7 1137 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 CCDC17Q96LX7 622 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 TSGA10Q9BZW7 698 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 NT5C3AQ9H0P0 336 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 KCNMB3Q9NPA1 279 aa22.09■■□□□ 1.13
SCUBE1-201ENST00000290460 KDM3AQ9Y4C1 1321 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 POTEFA5A3E0 1075 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 MED24O75448 989 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 POTEIP0CG38 1075 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 GFPT1Q06210 699 aaPredicted RBP22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 POTEGQ6S5H5 508 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 POTEEQ6S8J3 1075 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 SH3BP5LQ7L8J4 393 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 ANKRD13CQ8N6S4 541 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 GBP3Q9H0R5 595 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 BMP2KQ9NSY1 1161 aaPredicted RBP22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 FAM198AQ9UFP1 575 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 PCDHA2Q9Y5H9 948 aa22.08■■□□□ 1.13
SCUBE1-201ENST00000290460 MEIS2O14770 477 aa22.08■■□□□ 1.12
SCUBE1-201ENST00000290460 USO1O60763 962 aaKnown RBP22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms