RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 PRAMEF18Q5VWM3 479 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 CCDC65Q8IXS2 484 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 LRRC15Q8TF66 581 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 CLEC4DQ8WXI8 215 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 TBC1D5Q92609 795 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 NAP1L5Q96NT1 182 aaPredicted RBP21.16■□□□□ 0.98
VBP1-201ENST00000286428 THAP9Q9H5L6 903 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 RAVER2Q9HCJ3 691 aaKnown RBP21.16■□□□□ 0.98
VBP1-201ENST00000286428 MAGEC2Q9UBF1 373 aaPredicted RBP21.16■□□□□ 0.98
VBP1-201ENST00000286428 CSADQ9Y600 493 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 DOCK1Q14185 1865 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 ZC3H4Q9UPT8 1303 aaKnown RBP21.15■□□□□ 0.98
VBP1-201ENST00000286428 MEIS1O00470 390 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 PLA2G4BP0C869 781 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 DSG3P32926 999 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 IREB2P48200 963 aaKnown RBP21.15■□□□□ 0.98
VBP1-201ENST00000286428 PPP2R5CQ13362 524 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 SH3D19Q5HYK7 790 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 LRCH2Q5VUJ6 765 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 SPECC1LQ69YQ0 1117 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 XRRA1Q6P2D8 792 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 FOXR2Q6PJQ5 311 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 MXRA8Q9BRK3 442 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 TUFT1Q9NNX1 390 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 SPTLC3Q9NUV7 552 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 LIMA1Q9UHB6 759 aaKnown RBP21.15■□□□□ 0.98
VBP1-201ENST00000286428 AFG3L2Q9Y4W6 797 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 GOLGB1Q14789 3259 aaKnown RBP21.15■□□□□ 0.98
VBP1-201ENST00000286428 USP2O75604 605 aaPredicted RBP21.15■□□□□ 0.98
VBP1-201ENST00000286428 OFD1O75665 1012 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 SKILP12757 684 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 EEF1GP26641 437 aaKnown RBP21.15■□□□□ 0.98
VBP1-201ENST00000286428 CATSPER3Q86XQ3 398 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 SLC5A5Q92911 643 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 P2RX5Q93086 422 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 TRERF1Q96PN7 1200 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 RIT2Q99578 217 aa21.15■□□□□ 0.98
VBP1-201ENST00000286428 RPTORQ8N122 1335 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 ATP2A1O14983 1001 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 GAS7O60861 476 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 IDEP14735 1019 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 TAL1P17542 331 aaPredicted RBP21.14■□□□□ 0.97
VBP1-201ENST00000286428 HMGCS2P54868 508 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 PCNX4Q63HM2 1172 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 CATSPERGQ6ZRH7 1159 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 OTOP1Q7RTM1 612 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 GUF1Q8N442 669 aaKnown RBP21.14■□□□□ 0.97
VBP1-201ENST00000286428 L3MBTL3Q96JM7 780 aaPredicted RBP21.14■□□□□ 0.97
VBP1-201ENST00000286428 TRIM47Q96LD4 638 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 ZNF577Q9BSK1 485 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 VAV3Q9UKW4 847 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 ADAMTS5Q9UNA0 930 aa21.14■□□□□ 0.97
VBP1-201ENST00000286428 PSMD10O75832 226 aa21.13■□□□□ 0.97
VBP1-201ENST00000286428 ECM1Q16610 540 aa21.13■□□□□ 0.97
VBP1-201ENST00000286428 TCP11X2Q5H9J9 407 aa21.13■□□□□ 0.97
VBP1-201ENST00000286428 RNF207Q6ZRF8 634 aa21.13■□□□□ 0.97
VBP1-201ENST00000286428 DYMQ7RTS9 669 aa21.13■□□□□ 0.97
VBP1-201ENST00000286428 NEK9Q8TD19 979 aa21.13■□□□□ 0.97
VBP1-201ENST00000286428 GJA10Q969M2 543 aa21.13■□□□□ 0.97
VBP1-201ENST00000286428 TEKT3Q9BXF9 490 aa21.13■□□□□ 0.97
VBP1-201ENST00000286428 ADD3Q9UEY8 706 aaKnown RBP21.13■□□□□ 0.97
VBP1-201ENST00000286428 MAPK8IP1Q9UQF2 711 aa21.13■□□□□ 0.97
VBP1-201ENST00000286428 POTEB3A0JP26 581 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 POTECB2RU33 542 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 KCNJ18B7U540 433 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 NFIBO00712 420 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 MED24O75448 989 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 SSBP05455 408 aaKnown RBP eCLIP21.12■□□□□ 0.97
VBP1-201ENST00000286428 KRT18P05783 430 aaKnown RBP21.12■□□□□ 0.97
VBP1-201ENST00000286428 TPM1P09493 284 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 KCNJ6P48051 423 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 STK4Q13043 487 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 KCNJ12Q14500 433 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 HSP90AA4PQ58FG1 418 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 POTEBQ6S5H4 581 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 SYT2Q8N9I0 419 aaPredicted RBP21.12■□□□□ 0.97
VBP1-201ENST00000286428 EIF2AK1Q9BQI3 630 aaKnown RBP21.12■□□□□ 0.97
VBP1-201ENST00000286428 PANK4Q9NVE7 773 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 STAT3P40763 770 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 LRRC63Q05C16 580 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 DNTTIP2Q5QJE6 756 aaKnown RBP21.12■□□□□ 0.97
VBP1-201ENST00000286428 KCNK18Q7Z418 384 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 CSGALNACT2Q8N6G5 542 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 CYP2W1Q8TAV3 490 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 SYTL5Q8TDW5 730 aaPredicted RBP21.12■□□□□ 0.97
VBP1-201ENST00000286428 ATG4CQ96DT6 458 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 TSG101Q99816 390 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 PYCARDQ9ULZ3 195 aa21.12■□□□□ 0.97
VBP1-201ENST00000286428 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.12■□□□□ 0.97
VBP1-201ENST00000286428 SBF1O95248 1867 aa21.11■□□□□ 0.97
VBP1-201ENST00000286428 E9PMD0 336 aa21.11■□□□□ 0.97
VBP1-201ENST00000286428 IPO5O00410 1097 aaKnown RBP21.11■□□□□ 0.97
VBP1-201ENST00000286428 N4BP3O15049 544 aa21.11■□□□□ 0.97
VBP1-201ENST00000286428 CCP110O43303 1012 aa21.11■□□□□ 0.97
VBP1-201ENST00000286428 YBX3P16989 372 aaKnown RBP eCLIP21.11■□□□□ 0.974e-7■□□□□ 10.1
VBP1-201ENST00000286428 LRMPQ12912 555 aa21.11■□□□□ 0.97
VBP1-201ENST00000286428 TTI2Q6NXR4 508 aa21.11■□□□□ 0.97
VBP1-201ENST00000286428 FRMPD4Q14CM0 1322 aa21.1■□□□□ 0.97
VBP1-201ENST00000286428 MAFGO15525 162 aa21.1■□□□□ 0.97
VBP1-201ENST00000286428 SPATA31C1P0DKV0 1188 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms