RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 A0A0G2JND7 137 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 SSTR3P32745 418 aaPredicted RBP18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 RBM6P78332 1123 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 PSPC1Q8WXF1 523 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 PRKAB2O43741 272 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 PRPSAP1Q14558 356 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 UBE2SQ16763 222 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 FBXO38Q6PIJ6 1188 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 HAUS8Q9BT25 410 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 USP44Q9H0E7 712 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 ANTXR1Q9H6X2 564 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 CCPG1Q9ULG6 757 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 STX1BP61266 288 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 ACTN3Q08043 901 aaPredicted RBP18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 KRT80Q6KB66 452 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 YIPF3Q9GZM5 350 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 CYP2D7A0A087X1C5 515 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 EPHB4P54760 987 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 PTK2Q05397 1052 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 PI16Q6UXB8 463 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 MT-ND3P03897 115 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 PDCLQ13371 301 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 ZC3H18Q86VM9 953 aaKnown RBP18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 PIK3R5Q8WYR1 880 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 RAPGEF5Q92565 580 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 GCNT4Q9P109 453 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
TSPAN3-201ENST00000267970 GDF11O95390 407 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 ECEL1O95672 775 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 ATP1A3P13637 1013 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 BBS9Q3SYG4 887 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 FAM193BQ96PV7 902 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 NCAPGQ9BPX3 1015 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 NBPF3Q9H094 633 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 LARSQ9P2J5 1176 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 CARMIL3Q8ND23 1372 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 TOGARAM2Q6ZUX3 1019 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 SLFN12Q8IYM2 578 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 SLC38A10Q9HBR0 1119 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 GJB4Q9NTQ9 266 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 IRAK4Q9NWZ3 460 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 SCOCQ9UIL1 159 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 PCDHA13Q9Y5I0 950 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 FAM47EQ6ZV65 393 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 EFCAB13Q8IY85 973 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 LSG1Q9H089 658 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 PCDHA1Q9Y5I3 950 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 COL4A3BPQ9Y5P4 624 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 MFAP3P55082 362 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 KCNQ4P56696 695 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 EPS15L1Q9UBC2 864 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 PMS1P54277 932 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 TFAMQ00059 246 aaKnown RBP18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 SLMAPQ14BN4 828 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 GREM2Q9H772 168 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 HACD3Q9P035 362 aa18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
TSPAN3-201ENST00000267970 NAA30Q147X3 362 aaPredicted RBP18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 TADA3O75528 432 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 CEP19Q96LK0 163 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 EXOC1LA0A1B0GW35 172 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 DNAJC6O75061 913 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 RANBP1P43487 201 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 TTC17Q96AE7 1141 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 ORC6Q9Y5N6 252 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 AFPP02771 609 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 NR1D1P20393 614 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 MKRN3Q13064 507 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 CASP8Q14790 479 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 PCGF5Q86SE9 256 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 LARP4BQ92615 738 aaKnown RBP18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 NPR1P16066 1061 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 ICA1Q05084 483 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 NSUN2Q08J23 767 aaKnown RBP eCLIP18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 SZRD1Q7Z422 152 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 SPDYE1Q8NFV5 336 aaPredicted RBP18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 ZNF577Q9BSK1 485 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 PLAAQ9Y263 795 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 MED23Q9ULK4 1368 aa18.18■□□□□ 0.5
TSPAN3-201ENST00000267970 PALM3A6NDB9 673 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 DNAJC8O75937 253 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 LMNB1P20700 586 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 ANO4Q32M45 955 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 NUGGCQ68CJ6 796 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 KRT27Q7Z3Y8 459 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 HAUS2Q9NVX0 235 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 SOS2Q07890 1332 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 ZNF18P17022 549 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 DAB2P98082 770 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 CHRNDQ07001 517 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 SPATS2Q86XZ4 545 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 NT5C1BQ96P26 610 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 ADPGKQ9BRR6 497 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 CAPN11Q9UMQ6 739 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 URB2Q14146 1524 aaKnown RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 MAST3O60307 1309 aa18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 ESRRAP11474 423 aaPredicted RBP18.17■□□□□ 0.5
TSPAN3-201ENST00000267970 P2RX5Q93086 422 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms