RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 CABP7Q86V35 215 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 HPS3Q969F9 1004 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 SEMA6BQ9H3T3 888 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 RAD51CO43502 376 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 TMOD1P28289 359 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 TNNC1P63316 161 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 BIRC3Q13489 604 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 NKX1-1Q15270 411 aaPredicted RBP16.48■□□□□ 0.23
XRCC1-201ENST00000262887 MAN2A1Q16706 1144 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 TOM1L2Q6ZVM7 507 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 ARMC9Q7Z3E5 817 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 TAX1BP1Q86VP1 789 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 BAP1Q92560 729 aa16.48■□□□□ 0.23
XRCC1-201ENST00000262887 SSU72P8A0A1W2PR75 194 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 C5orf60A6NFR6 353 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 INF2Q27J81 1249 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 ODF2Q5BJF6 829 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 RUFY4Q6ZNE9 571 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 KLHL7Q8IXQ5 586 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 KIAA0895Q8NCT3 520 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 OR2W6PQ8NHA6 318 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 P3H4Q92791 437 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 SLC39A2Q9NP94 309 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 TMOD3Q9NYL9 352 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 LRP5O75197 1615 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 H0YGN5 161 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 ATP2C2O75185 946 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 ECM2O94769 699 aaPredicted RBP16.47■□□□□ 0.23
XRCC1-201ENST00000262887 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
XRCC1-201ENST00000262887 INHBEP58166 350 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 PDXDC1Q6P996 788 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 C7orf25Q9BPX7 421 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 RIOK1Q9BRS2 568 aaKnown RBP16.47■□□□□ 0.23
XRCC1-201ENST00000262887 ISCUQ9H1K1 167 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 PACSIN2Q9UNF0 486 aaPredicted RBP16.47■□□□□ 0.23
XRCC1-201ENST00000262887 NFS1Q9Y697 457 aa16.47■□□□□ 0.23
XRCC1-201ENST00000262887 PPP2R2AP63151 447 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 DYNLL1P63167 89 aaKnown RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 BYSLQ13895 437 aaKnown RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 FAM47AQ5JRC9 791 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 GKAP1Q5VSY0 366 aaPredicted RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 LRRC45Q96CN5 670 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 TRIM6Q9C030 488 aaPredicted RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 LUC7LQ9NQ29 371 aaKnown RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 FLT1P17948 1338 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 OPLAHO14841 1288 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 MGRN1O60291 552 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 DNAJC8O75937 253 aaPredicted RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 MYBP10242 640 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 GBP2P32456 591 aaPredicted RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 KIF5BP33176 963 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 CTNNA1P35221 906 aaKnown RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 EHHADHQ08426 723 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 ZNF844Q08AG5 666 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 TXNRD1Q16881 649 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 NBPF9Q3BBW0 867 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 CENPPQ6IPU0 288 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 EIF1ADQ8N9N8 165 aaKnown RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 RAPGEF5Q92565 580 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 HVCN1Q96D96 273 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 INPP4AQ96PE3 977 aaPredicted RBP16.46■□□□□ 0.23
XRCC1-201ENST00000262887 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.23
XRCC1-201ENST00000262887 FRMD3A2A2Y4 597 aa16.46■□□□□ 0.22
XRCC1-201ENST00000262887 LAD1O00515 517 aa16.46■□□□□ 0.22
XRCC1-201ENST00000262887 AMPD3Q01432 767 aa16.46■□□□□ 0.22
XRCC1-201ENST00000262887 SLC9C1Q4G0N8 1177 aa16.46■□□□□ 0.22
XRCC1-201ENST00000262887 HGSNATQ68CP4 663 aa16.46■□□□□ 0.22
XRCC1-201ENST00000262887 TATDN2Q93075 761 aa16.46■□□□□ 0.22
XRCC1-201ENST00000262887 KDM4CQ9H3R0 1056 aa16.46■□□□□ 0.22
XRCC1-201ENST00000262887 SH3BP1Q9Y3L3 701 aa16.46■□□□□ 0.22
XRCC1-201ENST00000262887 BACH1O14867 736 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 PAEPP09466 180 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 FGRP09769 529 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 ATF3P18847 181 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 ERVK-9P63128 1117 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 UAP1Q16222 522 aaPredicted RBP16.45■□□□□ 0.22
XRCC1-201ENST00000262887 MEI1Q5TIA1 1274 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 MSL1Q68DK7 614 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 USP38Q8NB14 1042 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 TANGO6Q9C0B7 1094 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 NLRC4Q9NPP4 1024 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 SH3GLB2Q9NR46 395 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 USP17L12C9JPN9 530 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 USP17L21D6R901 530 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 RBAK-RBAKDNI3L0D1 243 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 RTN2O75298 545 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 RPSAP08865 295 aaKnown RBP16.45■□□□□ 0.22
XRCC1-201ENST00000262887 GHRP10912 638 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 PRPHP41219 470 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 CUL1Q13616 776 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 NAA25Q14CX7 972 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 AGBL2Q5U5Z8 902 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 CPLX4Q7Z7G2 160 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 CCT6BQ92526 530 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 CALR3Q96L12 384 aaKnown RBP16.45■□□□□ 0.22
XRCC1-201ENST00000262887 AK8Q96MA6 479 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 PCDHA6Q9UN73 950 aa16.45■□□□□ 0.22
XRCC1-201ENST00000262887 PCDHA8Q9Y5H6 950 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms