RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 SLC37A4O43826 429 aa19.27■□□□□ 0.67
TRAM1-201ENST00000262213 GUCY2CP25092 1073 aa19.27■□□□□ 0.67
TRAM1-201ENST00000262213 KLRC1P26715 233 aa19.27■□□□□ 0.67
TRAM1-201ENST00000262213 HPDP32754 393 aaPredicted RBP19.27■□□□□ 0.67
TRAM1-201ENST00000262213 SF3B3Q15393 1217 aaKnown RBP19.27■□□□□ 0.67
TRAM1-201ENST00000262213 HGSNATQ68CP4 663 aa19.27■□□□□ 0.67
TRAM1-201ENST00000262213 REXO1Q8N1G1 1221 aaKnown RBP19.27■□□□□ 0.67
TRAM1-201ENST00000262213 SNX29Q8TEQ0 813 aa19.27■□□□□ 0.67
TRAM1-201ENST00000262213 TBC1D5Q92609 795 aa19.27■□□□□ 0.67
TRAM1-201ENST00000262213 DDX12PQ92771 950 aa19.27■□□□□ 0.67
TRAM1-201ENST00000262213 PACSIN1Q9BY11 444 aa19.27■□□□□ 0.67
TRAM1-201ENST00000262213 LAMB1P07942 1786 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 H0YHG0 523 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 GNA11P29992 359 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 MNAT1P51948 309 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 SEC24CP53992 1094 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 SFMBT2Q5VUG0 894 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 LRRC55Q6ZSA7 311 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 CASKIN2Q8WXE0 1202 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 GOLPH3Q9H4A6 298 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 FRMPD2Q68DX3 1309 aaPredicted RBP19.26■□□□□ 0.67
TRAM1-201ENST00000262213 TLR2O60603 784 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 KIAA0754O94854 1291 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 CACNB1Q02641 598 aaPredicted RBP19.26■□□□□ 0.67
TRAM1-201ENST00000262213 PAK2Q13177 524 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 SEMA3FQ13275 785 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 SLC9C1Q4G0N8 1177 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 COA7Q96BR5 231 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 TSG101Q99816 390 aa19.26■□□□□ 0.67
TRAM1-201ENST00000262213 MYO1FO00160 1098 aa19.25■□□□□ 0.67
TRAM1-201ENST00000262213 PJA2O43164 708 aa19.25■□□□□ 0.67
TRAM1-201ENST00000262213 FGFR1OPO95684 399 aaKnown RBP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 EPB41P11171 864 aaKnown RBP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 HNRNPH1P31943 449 aaKnown RBP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 SKOR1P84550 965 aa19.25■□□□□ 0.67
TRAM1-201ENST00000262213 HLTFQ14527 1009 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 ASTE1Q2TB18 679 aaPredicted RBP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 RNF187Q5TA31 235 aaPredicted RBP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 OTUD6BQ8N6M0 293 aa19.25■□□□□ 0.67
TRAM1-201ENST00000262213 IQCDQ96DY2 449 aa19.25■□□□□ 0.67
TRAM1-201ENST00000262213 GPR101Q96P66 508 aaPredicted RBP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 KIAA1551Q9HCM1 1747 aa19.25■□□□□ 0.67
TRAM1-201ENST00000262213 COL22A1Q8NFW1 1626 aaPredicted RBP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 LDHBP07195 334 aaKnown RBP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 RASA1P20936 1047 aa19.25■□□□□ 0.67
TRAM1-201ENST00000262213 FAM83BQ5T0W9 1011 aa19.25■□□□□ 0.67
TRAM1-201ENST00000262213 GUF1Q8N442 669 aaKnown RBP19.25■□□□□ 0.67
TRAM1-201ENST00000262213 SCN7AQ01118 1682 aa19.25■□□□□ 0.67
TRAM1-201ENST00000262213 LSP1P33241 339 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 KIAA0753Q2KHM9 967 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 ADAMTS1Q9UHI8 967 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 FAM170AA1A519 330 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 NR1D1P20393 614 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 TMEM266Q2M3C6 531 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 CEP85LQ5SZL2 805 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 TBC1D9BQ66K14 1250 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 GPATCH11Q8N954 259 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 FAM133AQ8N9E0 248 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 RUBCNQ92622 972 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 GDF3Q9NR23 364 aa19.24■□□□□ 0.67
TRAM1-201ENST00000262213 IQCKQ8N0W5 287 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 PIK3R5Q8WYR1 880 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 ANKS1AQ92625 1134 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 EYA3Q99504 573 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 FGFBP2Q9BYJ0 223 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 A0A087X0T9 212 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 RAD51CO43502 376 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 MARCH6O60337 910 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 FAM228BP0C875 321 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 TNNI2P48788 182 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 LRRC63Q05C16 580 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 MCTP2Q6DN12 878 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 KCNV1Q6PIU1 500 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 OR2W6PQ8NHA6 318 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 RAD54LQ92698 747 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 DOT1LQ8TEK3 1739 aa19.23■□□□□ 0.67
TRAM1-201ENST00000262213 USP17L5A8MUK1 530 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 NOL4O94818 638 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 GLE1Q53GS7 698 aaKnown RBP19.22■□□□□ 0.67
TRAM1-201ENST00000262213 MYOCDQ8IZQ8 938 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 ZHX3Q9H4I2 956 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 PLAAQ9Y263 795 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 COL4A3BPQ9Y5P4 624 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 PVALEFA0A1B0GWK0 134 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 KCNQ2O43526 872 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 EIF6P56537 245 aaKnown RBP19.22■□□□□ 0.67
TRAM1-201ENST00000262213 ECM1Q16610 540 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 KRT79Q5XKE5 535 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 B4GALNT4Q76KP1 1039 aa19.22■□□□□ 0.67
TRAM1-201ENST00000262213 DDX42Q86XP3 938 aaKnown RBP eCLIP19.22■□□□□ 0.67
TRAM1-201ENST00000262213 RNF10Q8N5U6 811 aaKnown RBP19.22■□□□□ 0.67
TRAM1-201ENST00000262213 PPANQ9NQ55 473 aaKnown RBP19.22■□□□□ 0.67
TRAM1-201ENST00000262213 BCCIPQ9P287 314 aaKnown RBP eCLIP19.22■□□□□ 0.67
TRAM1-201ENST00000262213 SSU72P8A0A1W2PR75 194 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 KCNK3O14649 394 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 SERPING1P05155 500 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 TNFRSF8P28908 595 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 DDB1Q16531 1140 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 NAA35Q5VZE5 725 aa19.21■□□□□ 0.67
TRAM1-201ENST00000262213 SPZ1Q9BXG8 430 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms