RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 OTOP1Q7RTM1 612 aa6.35□□□□□ -1.39
CCDC54-201ENST00000261058 IGSF22Q8N9C0 903 aa6.35□□□□□ -1.39
CCDC54-201ENST00000261058 PANK1Q8TE04 598 aa6.35□□□□□ -1.39
CCDC54-201ENST00000261058 SLC6A20Q9NP91 592 aa6.35□□□□□ -1.39
CCDC54-201ENST00000261058 SAMD15Q9P1V8 674 aa6.35□□□□□ -1.39
CCDC54-201ENST00000261058 COA3Q9Y2R0 106 aaPredicted RBP6.35□□□□□ -1.39
CCDC54-201ENST00000261058 COL4A3BPQ9Y5P4 624 aa6.35□□□□□ -1.39
CCDC54-201ENST00000261058 CBX4O00257 560 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 TRAF5O00463 557 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 DGKIO75912 1065 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 AMY2AP04746 511 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 APPP05067 770 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 SRGAP2CP0DJJ0 459 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 PYGMP11217 842 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 AMY2BP19961 511 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 SOX5P35711 763 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 GALK1P51570 392 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 CFAP100Q494V2 611 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 PIK3R6Q5UE93 754 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 CYP4F22Q6NT55 531 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 PAQR3Q6TCH7 311 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 UBE2R2Q712K3 238 aaPredicted RBP6.34□□□□□ -1.39
CCDC54-201ENST00000261058 UHMK1Q8TAS1 419 aaKnown RBP6.34□□□□□ -1.39
CCDC54-201ENST00000261058 INTS4Q96HW7 963 aaKnown RBP6.34□□□□□ -1.39
CCDC54-201ENST00000261058 GOLGA2P5Q9HBQ8 144 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 SMURF1Q9HCE7 757 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 PCDH12Q9NPG4 1184 aa6.34□□□□□ -1.39
CCDC54-201ENST00000261058 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.33□□□□□ -1.4
CCDC54-201ENST00000261058 GLI1P08151 1106 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 PDE6AP16499 860 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 SPIRE1Q08AE8 756 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 DHCR24Q15392 516 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 GPR19Q15760 415 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 BICRALQ6AI39 1079 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 HHIPL2Q6UWX4 724 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 DCP2Q8IU60 420 aaKnown RBP6.33□□□□□ -1.4
CCDC54-201ENST00000261058 ZCRB1Q8TBF4 217 aaKnown RBP6.33□□□□□ -1.4
CCDC54-201ENST00000261058 SH3RF2Q8TEC5 729 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 WNK4Q96J92 1243 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 KCNJ15Q99712 375 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 SLC6A17Q9H1V8 727 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 ZNF652Q9Y2D9 606 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 M0R2C6 588 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 HRKO00198 91 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 BIN1O00499 593 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 NKRFO15226 690 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCDC54-201ENST00000261058 SGSM2O43147 1006 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 KPNA6O60684 536 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 EYA4O95677 639 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 F2P00734 622 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 GNAT1P11488 350 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 NEK4P51957 841 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 EPHA5P54756 1037 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 YBX1P67809 324 aaKnown RBP6.33□□□□□ -1.4
CCDC54-201ENST00000261058 DSG1Q02413 1049 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 CABP7Q86V35 215 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 ZSWIM9Q86XI8 627 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 IRF2BP1Q8IU81 584 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 CHST14Q8NCH0 376 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 PIP4K2CQ8TBX8 421 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 USP33Q8TEY7 942 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 SEC14L1Q92503 715 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 FAM126AQ9BYI3 521 aaPredicted RBP6.33□□□□□ -1.4
CCDC54-201ENST00000261058 B4GALT6Q9UBX8 382 aa6.33□□□□□ -1.4
CCDC54-201ENST00000261058 DNM2P50570 870 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 ST5P78524 1137 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 NR1I3Q14994 352 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 CHRNA2Q15822 529 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 CRY1Q16526 586 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 SIRT2Q8IXJ6 389 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 TSPAN17Q96FV3 270 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 PEX11GQ96HA9 241 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 SMOC1Q9H4F8 434 aa6.32□□□□□ -1.4
CCDC54-201ENST00000261058 NOP58Q9Y2X3 529 aaKnown RBP6.32□□□□□ -1.4
CCDC54-201ENST00000261058 CARMIL2Q6F5E8 1435 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 A0A1W2PQJ5 194 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 KRIT1O00522 736 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 MAN2B1O00754 1011 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 HGSO14964 777 aaPredicted RBP6.31□□□□□ -1.4
CCDC54-201ENST00000261058 PAX4O43316 350 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 MPOP05164 745 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 BPIP17213 487 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 JUNBP17275 347 aaPredicted RBP6.31□□□□□ -1.4
CCDC54-201ENST00000261058 MAPKAPK2P49137 400 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 JAM2P57087 298 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 ARHGAP44Q17R89 818 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 STEAP3Q658P3 488 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 RPTNQ6XPR3 784 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 ARHGAP36Q6ZRI8 547 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 STRA8Q7Z7C7 330 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 OSTM1Q86WC4 334 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 NOSTRINQ8IVI9 506 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 PHOSPHO1Q8TCT1 267 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 PUS7Q96PZ0 661 aaKnown RBP6.31□□□□□ -1.4
CCDC54-201ENST00000261058 CATSPERZQ9NTU4 200 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 KLHL14Q9P2G3 628 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 SRPK3Q9UPE1 567 aa6.31□□□□□ -1.4
CCDC54-201ENST00000261058 ZNF503-AS2A6NEH8 195 aa6.3□□□□□ -1.4
CCDC54-201ENST00000261058 ZBTB48P10074 688 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms