RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 CCDC127Q96BQ5 260 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 GPBP1L1Q9HC44 474 aaPredicted RBP11.99□□□□□ -0.49
MSH6-201ENST00000234420 TYW1Q9NV66 732 aaKnown RBP11.99□□□□□ -0.49
MSH6-201ENST00000234420 TMA7Q9Y2S6 64 aaKnown RBP11.99□□□□□ -0.49
MSH6-201ENST00000234420 GDF11O95390 407 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 CPA1P15085 419 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 SLCO1A2P46721 670 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 NUMBP49757 651 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 PDE1AP54750 535 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 STX1BP61266 288 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 KCNA1Q09470 495 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 NNTQ13423 1086 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 TERF2Q15554 542 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 SCARA5Q6ZMJ2 495 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 SARS2Q9NP81 518 aaKnown RBP11.99□□□□□ -0.49
MSH6-201ENST00000234420 SUCLA2Q9P2R7 463 aaPredicted RBP11.99□□□□□ -0.49
MSH6-201ENST00000234420 CENPAP49450 140 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 APBA1Q02410 837 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 SLC44A4Q53GD3 710 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 SNX29Q8TEQ0 813 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 INTS4Q96HW7 963 aaKnown RBP11.99□□□□□ -0.49
MSH6-201ENST00000234420 C21orf2O43822 256 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 PTPREP23469 700 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 CUL3Q13618 768 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 CCNYQ8ND76 341 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 PPHLN1Q8NEY8 458 aaKnown RBP11.99□□□□□ -0.49
MSH6-201ENST00000234420 NELFBQ8WX92 580 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 V9GY48 417 aaPredicted RBP11.99□□□□□ -0.49
MSH6-201ENST00000234420 TNRQ92752 1358 aa11.99□□□□□ -0.49
MSH6-201ENST00000234420 ARHGAP10A1A4S6 786 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 INHBAP08476 426 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 ATF2P15336 505 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 DSTYKQ6XUX3 929 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 MAML1Q92585 1016 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 PHKBQ93100 1093 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 COA7Q96BR5 231 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 SLC38A10Q9HBR0 1119 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 ATP8A1Q9Y2Q0 1164 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 MAST3O60307 1309 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 CDK13Q14004 1512 aaKnown RBP11.98□□□□□ -0.49
MSH6-201ENST00000234420 FAM47DPA6NHR8 397 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 PRPF4O43172 522 aaKnown RBP eCLIP11.98□□□□□ -0.491e-7■■■■■ 27.4
MSH6-201ENST00000234420 RHOBTB1O94844 696 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 VCAM1P19320 739 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 TMED2Q15363 201 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 HERC4Q5GLZ8 1057 aaPredicted RBP11.98□□□□□ -0.49
MSH6-201ENST00000234420 RGS9BPQ6ZS82 235 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 GPR101Q96P66 508 aaPredicted RBP11.98□□□□□ -0.49
MSH6-201ENST00000234420 PYCARDQ9ULZ3 195 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 SMARCA4P51532 1647 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 ENC1O14682 589 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 IRF1P10914 325 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 HDLBPQ00341 1268 aaKnown RBP11.98□□□□□ -0.49
MSH6-201ENST00000234420 SMAD1Q15797 465 aaKnown RBP11.98□□□□□ -0.49
MSH6-201ENST00000234420 ATG16L1Q676U5 607 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 CEP85Q6P2H3 762 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 STX18Q9P2W9 335 aaKnown RBP11.98□□□□□ -0.49
MSH6-201ENST00000234420 SNX5Q9Y5X3 404 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 HECW1Q76N89 1606 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 A6NJR5 290 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 ANO1Q5XXA6 986 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 MLKLQ8NB16 471 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 RNF139Q8WU17 664 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 ELAC2Q9BQ52 826 aaKnown RBP11.98□□□□□ -0.49
MSH6-201ENST00000234420 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
MSH6-201ENST00000234420 GOLGA8QA0A0J9YX86 632 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 GOLGA8OA6NCC3 632 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 GOLGA8NF8WBI6 632 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 TMEM191BP0C7N4 346 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 ATP2B4P23634 1241 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 GRK7Q8WTQ7 553 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 FAM149B1Q96BN6 582 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 DTNBP1Q96EV8 351 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 TRPV6Q9H1D0 765 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 EPB41L5Q9HCM4 733 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 PCDHB15Q9Y5E8 787 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 PTPRCP08575 1304 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 ADCY7P51828 1080 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 CCNA1P78396 465 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 SEPT2Q15019 361 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 BLZF1Q9H2G9 400 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 SLC12A6Q9UHW9 1150 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 NCOA2Q15596 1464 aa11.98□□□□□ -0.49
MSH6-201ENST00000234420 TECP42680 631 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 CREB3L3Q68CJ9 461 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 CSRNP1Q96S65 589 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 SERPINI1Q99574 410 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 PLCH2O75038 1416 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 CEP78Q5JTW2 689 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 FBXL13Q8NEE6 735 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 BTN2A2Q8WVV5 523 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 OMA1Q96E52 524 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 ZFYVE1Q9HBF4 777 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 PCDHB4Q9Y5E5 795 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 IREB2P48200 963 aaKnown RBP11.97□□□□□ -0.49
MSH6-201ENST00000234420 YWHAGP61981 247 aaKnown RBP eCLIP11.97□□□□□ -0.49
MSH6-201ENST00000234420 HAUS3Q68CZ6 603 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 ADCK1Q86TW2 530 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 OLFM3Q96PB7 478 aa11.97□□□□□ -0.49
MSH6-201ENST00000234420 GYG2O15488 501 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms