RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 RPGRIP1Q96KN7 1286 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 PIGSQ96S52 555 aa14.37□□□□□ -0.11
COL1A1-201ENST00000225964 FAM186BQ8IYM0 893 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 COA7Q96BR5 231 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 ZFYVE16Q7Z3T8 1539 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 LMNB2Q03252 620 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 CFAP61Q8NHU2 1237 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 EEF2KMTQ96G04 330 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 GBP5Q96PP8 586 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 SEC31BQ9NQW1 1179 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 ITM2BQ9Y287 266 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 ADAMTS12P58397 1594 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 PDE8BO95263 885 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 ZNF18P17022 549 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 NLRP4Q96MN2 994 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 PPP2R2CQ9Y2T4 447 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 SART1O43290 800 aaKnown RBP14.36□□□□□ -0.11
COL1A1-201ENST00000225964 WHAMMQ8TF30 809 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 MTRQ99707 1265 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 SUDS3Q9H7L9 328 aaPredicted RBP14.36□□□□□ -0.11
COL1A1-201ENST00000225964 USP17L3A6NCW0 530 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 USP17L4A6NCW7 530 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 EEF1GP26641 437 aaKnown RBP14.36□□□□□ -0.11
COL1A1-201ENST00000225964 COPB1P53618 953 aaKnown RBP14.36□□□□□ -0.11
COL1A1-201ENST00000225964 EHHADHQ08426 723 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 USP17L1Q7RTZ2 530 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 WDR11Q9BZH6 1224 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 TSPOAP1O95153 1857 aa14.36□□□□□ -0.11
COL1A1-201ENST00000225964 RCN2Q14257 317 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 EAF2Q96CJ1 260 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-201ENST00000225964 SPECC1L-ADORA2AF8WAN1 911 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 LAD1O00515 517 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 DDIT3P35638 169 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 SCRN1Q12765 414 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 UBE2SQ16763 222 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 MMTAG2Q9BU76 263 aaKnown RBP14.35□□□□□ -0.11
COL1A1-201ENST00000225964 TM6SF1Q9BZW5 370 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 UBE2TQ9NPD8 197 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-201ENST00000225964 GOLGA8QA0A0J9YX86 632 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 GOLGA8OA6NCC3 632 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 GOLGA8NF8WBI6 632 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 SPATA1Q5VX52 437 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 CIAPIN1Q6FI81 312 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 EFCAB13Q8IY85 973 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 TBCKQ8TEA7 893 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 CDHR1Q96JP9 859 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 Q9H521 79 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 FANCLQ9NW38 375 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 HACD3Q9P035 362 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 ORC6Q9Y5N6 252 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 IL17REQ8NFR9 667 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 DEPDC1BQ8WUY9 529 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 MX2P20592 715 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 CMA1P23946 247 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 PHEXP78562 749 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 PHLDB3Q6NSJ2 640 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 DNAJC24Q6P3W2 148 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 TMC4Q7Z404 712 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 FAM49AQ9H0Q0 323 aaPredicted RBP14.35□□□□□ -0.11
COL1A1-201ENST00000225964 KIF24Q5T7B8 1368 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 KIAA0232Q92628 1395 aa14.35□□□□□ -0.11
COL1A1-201ENST00000225964 RWDD4Q6NW29 188 aaKnown RBP14.34□□□□□ -0.11
COL1A1-201ENST00000225964 TRIML1Q8N9V2 468 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 FGD4Q96M96 766 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 TMEM206Q9H813 350 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 STK17AQ9UEE5 414 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 FBXW4P57775 412 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 RNF219Q5W0B1 726 aaPredicted RBP14.34□□□□□ -0.11
COL1A1-201ENST00000225964 C2orf69Q8N8R5 385 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 HSPH1Q92598 858 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 KANSL2Q9H9L4 492 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 MAGEF1Q9HAY2 307 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 PNMA3Q9UL41 463 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 MYOM2P54296 1465 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 SHANK2Q9UPX8 1470 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 SOS2Q07890 1332 aaPredicted RBP14.34□□□□□ -0.11
COL1A1-201ENST00000225964 CFAP74Q9C0B2 1584 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 PDXDC2PQ6P474 469 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 ABCC2Q92887 1545 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 PDIA3P30101 505 aaKnown RBP14.34□□□□□ -0.11
COL1A1-201ENST00000225964 MAGOHBQ96A72 148 aaKnown RBP14.34□□□□□ -0.11
COL1A1-201ENST00000225964 CALN1Q9BXU9 219 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 ZNF341Q9BYN7 854 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 KCNA4P22459 653 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 UBE3CQ15386 1083 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 SGO2Q562F6 1265 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 GPR101Q96P66 508 aaPredicted RBP14.34□□□□□ -0.11
COL1A1-201ENST00000225964 ARHGEF12Q9NZN5 1544 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 BASP1P80723 227 aaKnown RBP14.34□□□□□ -0.11
COL1A1-201ENST00000225964 ADCY1Q08828 1119 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 PCDHA7Q9UN72 937 aa14.34□□□□□ -0.11
COL1A1-201ENST00000225964 PRPSAP2O60256 369 aa14.33□□□□□ -0.11
COL1A1-201ENST00000225964 TMED2Q15363 201 aa14.33□□□□□ -0.11
COL1A1-201ENST00000225964 TUBGCP2Q9BSJ2 902 aa14.33□□□□□ -0.11
COL1A1-201ENST00000225964 ZSWIM6Q9HCJ5 1215 aa14.33□□□□□ -0.11
COL1A1-201ENST00000225964 LMBRD1Q9NUN5 540 aa14.33□□□□□ -0.11
COL1A1-201ENST00000225964 BBOX1O75936 387 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 THEM5Q8N1Q8 247 aa14.33□□□□□ -0.12
COL1A1-201ENST00000225964 EVI5O60447 810 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms