RNA–Protein interactions for RNA: ENSMUST00000027404.11

Ptprn-201, Transcript of Receptor-type tyrosine-protein phosphatase-like N, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptprn, Length 3,554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprn-201ENSMUST00000027404 Syce1Q9D495 329 aa17.68■□□□□ 0.42
Ptprn-201ENSMUST00000027404 NapaQ9DB05 295 aa17.68■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Shank3Q4ACU6 1730 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Arhgap6O54834 987 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Lilrb3P97484 841 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Kcnb1Q03717 857 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Tmem35bQ3U0Y2 150 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Trip13Q3UA06 432 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Lrrc55Q3UY51 311 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Rnf207Q3V3A7 635 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Haus6Q6NV99 933 aaKnown RBP17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Herc4Q6PAV2 1057 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Igdcc3Q8BQC3 813 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Lgi2Q8K4Z0 550 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Synpo2Q91YE8 1087 aaKnown RBP17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Kctd10Q922M3 315 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Greb1lB9EJV3 1913 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Sh3tc1G3X9F6 1346 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Ccdc25Q78PG9 208 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Krt79Q8VED5 531 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Arfgap2Q99K28 520 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Dph6Q9CQ28 267 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Efhd1Q9D4J1 240 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Rwdd2aQ9D9S3 292 aa17.67■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Zfp174B9EJW5 407 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Ppfibp2O35711 882 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Atxn2lQ7TQH0 1049 aaKnown RBP17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Armcx3Q8BHS6 379 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Q8BWG4 1187 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Pak2Q8CIN4 524 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Tor1aip1Q921T2 595 aaKnown RBP17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 4930449I24RikQ9D5E3 319 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Akap8Q9DBR0 687 aaKnown RBP17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Peak1Q69Z38 1735 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 PltpP55065 493 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 CgasQ8C6L5 507 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 TxlnbQ8VBT1 685 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Luc7lQ9CYI4 371 aaKnown RBP17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Drc1Q3USS3 753 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Tsg101Q61187 391 aa17.66■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Rsbn1lD3Z0K6 821 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Tom1O88746 492 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Irx1P81068 480 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Dnajc28Q8VCE1 385 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Arap2Q8BZ05 1703 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Cacna2d1O08532 1103 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Gas8Q60779 478 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Glg1Q61543 1175 aaKnown RBP17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Olfr832Q7TRG9 312 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Ssr1Q9CY50 286 aaKnown RBP17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Rpf2Q9JJ80 306 aaKnown RBP17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Arl6ip4Q9JM93 229 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Mroh9G5E8L9 891 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Rexo1Q7TT28 1213 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Spats2Q8K1N4 545 aaKnown RBP17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Capn9Q9D805 690 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Capn12Q9ER56 720 aa17.65■□□□□ 0.42
Ptprn-201ENSMUST00000027404 Myh13B1AR69 1938 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Vmn2r71L7N2D8 855 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Sh3gl1Q62419 368 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Msl1Q6PDM1 616 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Efcab14Q8BGQ6 484 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Podxl2Q8CAE9 603 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Calcoco1Q8CGU1 691 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 SncbQ91ZZ3 133 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Smtnl1Q99LM3 459 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Fam133bQ9CVI2 245 aaKnown RBP17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 CoasyQ9DBL7 563 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 AdnpQ9Z103 1108 aaKnown RBP17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Rps6ka4Q9Z2B9 773 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Pcdh11xF6ZNL5 1338 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Xrcc6P23475 608 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Ctnna1P26231 906 aaKnown RBP17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Pcif1P59114 706 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Slc30a9Q5IRJ6 567 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Anks6Q6GQX6 883 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Krt87Q6IMF0 495 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Znf18Q810A1 556 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Tmx4Q8C0L0 335 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Krt34Q9D646 392 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Serpinb12Q9D7P9 423 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Actn2Q9JI91 894 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Myh15E9Q264 1925 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Guca2bO09051 106 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Hsd17b1P51656 344 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Emc10Q3TAS6 258 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Dcaf17Q3TUL7 519 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Rapgef1Q3UHC1 1224 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Actn1Q7TPR4 892 aaKnown RBP17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Fnbp1Q80TY0 616 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Ddx19bQ8BZY3 494 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Sugp2Q8CH09 1067 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 AllcQ9JHX6 414 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 PigoQ9JJI6 1093 aa17.64■□□□□ 0.41
Ptprn-201ENSMUST00000027404 1700016G14RikA0A286YCZ6 238 aa17.63■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Trim43aQ3TL54 445 aa17.63■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Pacsin1Q61644 441 aa17.63■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Ankrd24Q80VM7 985 aa17.63■□□□□ 0.41
Ptprn-201ENSMUST00000027404 Trap1Q9CQN1 706 aaKnown RBP17.63■□□□□ 0.41
Ptprn-201ENSMUST00000027404 TbcbQ9D1E6 244 aa17.63■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms