RNA–Protein interactions for RNA: ENSMUST00000008004.9

Ddx49-201, Transcript of Probable ATP-dependent RNA helicase DDX49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx49, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49-201ENSMUST00000008004 Trim9Q8C7M3 817 aa17.28■□□□□ 0.36
Ddx49-201ENSMUST00000008004 Mrpl58Q8R035 206 aa17.28■□□□□ 0.36
Ddx49-201ENSMUST00000008004 Krt79Q8VED5 531 aa17.28■□□□□ 0.36
Ddx49-201ENSMUST00000008004 MyocdQ8VIM5 935 aa17.28■□□□□ 0.36
Ddx49-201ENSMUST00000008004 Usp26Q99MX1 835 aa17.28■□□□□ 0.36
Ddx49-201ENSMUST00000008004 Barx2O08686 283 aa17.27■□□□□ 0.36
Ddx49-201ENSMUST00000008004 Trpc6Q61143 930 aa17.27■□□□□ 0.36
Ddx49-201ENSMUST00000008004 Sun2Q8BJS4 731 aa17.27■□□□□ 0.36
Ddx49-201ENSMUST00000008004 4933402E13RikQ9D4D2 429 aa17.27■□□□□ 0.36
Ddx49-201ENSMUST00000008004 Baiap2l1Q9DBJ3 514 aa17.27■□□□□ 0.36
Ddx49-201ENSMUST00000008004 Zmynd8A2A484 1235 aaKnown RBP17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Zscan25B2RX31 543 aa17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Gm10436L7N1Y3 520 aa17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 SelpQ01102 768 aa17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Antxr2Q6DFX2 487 aa17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Ubap2lQ80X50 1107 aaKnown RBP17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Ctu1Q99J10 420 aa17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Dnajc18Q9CZJ9 357 aa17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Nap1l5Q9JJF0 156 aa17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Git2Q9JLQ2 708 aa17.27■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Pcdh11xF6ZNL5 1338 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Tal1P22091 329 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Hmgcs2P54869 508 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Trak2Q6P9N8 913 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Zdhhc15Q8BGJ0 337 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 TazI7HJS2 263 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 SfnO70456 248 aaKnown RBP17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Nol4P60954 483 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Kcna2P63141 499 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Rit2P70425 217 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Mrgprb1Q3UG61 350 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Znf652Q5DU09 608 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Slc45a1Q8BIV7 751 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Igdcc3Q8BQC3 813 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Nemp2Q8CB65 421 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Dctpp1Q9QY93 170 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Zbtb12Q9Z150 459 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 GsdmeQ9Z2D3 512 aa17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Ep400Q8CHI8 3072 aaKnown RBP17.26■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Kmt2eQ3UG20 1868 aa17.25■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Gm5624F6ZZG8 207 aa17.25■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Ppef1O35655 650 aa17.25■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Taf1bP97358 586 aa17.25■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Taok2Q6ZQ29 1240 aa17.25■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Eps8l1Q8R5F8 716 aa17.25■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Elp3Q9CZX0 547 aa17.25■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Pkd2l2Q9JLG4 621 aa17.25■□□□□ 0.35
Ddx49-201ENSMUST00000008004 MtrA6H5Y3 1253 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Lmntd2Q0VET5 664 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Ecm1Q61508 559 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Dnttip2Q8R2M2 758 aaKnown RBP17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Dqx1Q924H9 718 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Adgra2Q91ZV8 1336 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Stra6O70491 670 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Hoxc13P50207 328 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Trmt1Q3TX08 663 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Kansl1lQ5DTI6 991 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Asic1Q6NXK8 526 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Mcph1Q7TT79 822 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Camsap3Q80VC9 1252 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Dlk2Q8K1E3 382 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Tab2Q99K90 693 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 PycardQ9EPB4 193 aa17.24■□□□□ 0.35
Ddx49-201ENSMUST00000008004 A0A1L1SQF0 893 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Adcy5P84309 1262 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Krt9Q6RHW0 743 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Txndc16Q7TN22 820 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Tmc3Q7TQ69 1130 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Setdb2Q8C267 713 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Nxf1Q99JX7 618 aaKnown RBP17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Cul4bA2A432 970 aaKnown RBP17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Krt36B1AQ75 473 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Lig1P37913 916 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Syt2P46097 422 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Trappc3lQ4KL14 181 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Sox30Q8CGW4 782 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Tmx1Q8VBT0 278 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Ankrd1Q9CR42 319 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Mss51Q9D5Z5 446 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Magi2Q9WVQ1 1275 aa17.23■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Gm4307E9PZY4 289 aa17.22■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Gm4312K9J7E2 289 aa17.22■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Arhgap6O54834 987 aa17.22■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Kcnb1Q03717 857 aa17.22■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Epha7Q61772 998 aa17.22■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Ushbp1Q8R370 680 aa17.22■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Cacnb1Q8R3Z5 597 aa17.22■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Phtf1Q9QZ09 761 aa17.22■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Gm7168A0AUV4 508 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Prom1O54990 867 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 LtkP08923 888 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Foxn3Q499D0 457 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Tbc1d22bQ80VE5 505 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Ccdc38Q8CDN8 563 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Katnbl1Q9CWJ3 299 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Rbp7Q9EPC5 134 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Cnpy2Q9QXT0 182 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Tanc1Q0VGY8 1856 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Rabgap1A2AWA9 1064 aa17.21■□□□□ 0.35
Ddx49-201ENSMUST00000008004 Cyp2b10P12791 500 aa17.21■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 94.5 ms