RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Abcf2Q99LE6 628 aaKnown RBP17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Glrx3Q9CQM9 337 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Six6os1Q9CTN5 574 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Snx10Q9CWT3 201 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Sh3tc1G3X9F6 1346 aa17.87■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ccdc88aQ5SNZ0 1873 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Cd44P15379 778 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Hspa1lP16627 641 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 PltpP55065 493 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 HmmrQ00547 794 aaKnown RBP17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Kctd16Q5DTY9 427 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Glg1Q61543 1175 aaKnown RBP17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Atxn2lQ7TQH0 1049 aaKnown RBP17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Baiap3Q80TT2 1134 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ssr1Q9CY50 286 aaKnown RBP17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ascc1Q9D8Z1 356 aaKnown RBP17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 CoasyQ9DBL7 563 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Kat6bQ8BRB7 1872 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Akr1b10G5E895 316 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Vmn2r78K7N6U5 853 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Mapk6Q61532 720 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Eif3cQ8R1B4 911 aaKnown RBP17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 Psma7Q9Z2U0 248 aa17.86■□□□□ 0.45
Trim28-201ENSMUST00000005705 March10E9PX79 788 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Parp2O88554 559 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ap1m1P35585 423 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Gad1P48318 593 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Amhr2Q8K592 568 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Gm28510A0A087WP28 240 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Fam178bQ24JP3 464 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ddx19bQ8BZY3 494 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Atxn7Q8R4I1 867 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Add1Q9QYC0 735 aaKnown RBP17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Zfyve9A2A8R0 1397 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Tmem35bQ3U0Y2 150 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ccdc172Q810N9 267 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ushbp1Q8R370 680 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Pla2g12bQ99P27 195 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Lrp2bpQ9D4C6 346 aa17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Mrpl12Q9DB15 201 aaKnown RBP17.85■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ccdc88cQ6VGS5 2009 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Peak1Q69Z38 1735 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Herc3A6H6S0 1050 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Tmod1P49813 359 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Acot10Q32MW3 439 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Traf3ip3Q8C0G2 513 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Atp6v1aP50516 617 aaKnown RBP17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Trappc10Q3TLI0 1259 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Rnf207Q3V3A7 635 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Znrd1-asQ8R0E5 213 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Ddx47Q9CWX9 455 aaKnown RBP17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Slc12a7Q9WVL3 1083 aa17.84■□□□□ 0.45
Trim28-201ENSMUST00000005705 Pnpla6Q3TRM4 1355 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Zfp174B9EJW5 407 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Gm38392E9Q2A2 434 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Nol4P60954 483 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Rnpc3Q3UZ01 514 aaKnown RBP17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Arhgap44Q5SSM3 814 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Sumf1Q8R0F3 372 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Acsl3Q9CZW4 720 aaKnown RBP17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Rwdd2aQ9D9S3 292 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Trim10Q9WUH5 489 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Pex11aQ9Z211 246 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Plch1Q4KWH5 1682 aa17.83■□□□□ 0.45
Trim28-201ENSMUST00000005705 Psmc6P62334 389 aa17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Mybpc2Q5XKE0 1136 aa17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Jade3Q6IE82 823 aa17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Hook2Q7TMK6 716 aa17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 RalylQ8BTF8 293 aa17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Elmo3Q8BYZ7 720 aa17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ube2sQ921J4 223 aa17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Kctd10Q922M3 315 aa17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Hnrnph1O35737 449 aaKnown RBP17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Pip4k2aO70172 405 aa17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 LRWD1Q8BUI3 648 aaKnown RBP17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Akap8Q9DBR0 687 aaKnown RBP17.83■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ttc13A0A1L1SSC7 844 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Sema4dO09126 861 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Hnrnph2P70333 449 aaKnown RBP17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ano9P86044 747 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ccdc157Q5SPX1 718 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Tsga10Q6NY15 697 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Clca4aQ6Q473 924 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Rassf2Q8BMS9 326 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Spata2Q8K004 515 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 MypopQ8R4U1 393 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Dhx58Q99J87 678 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Klc4Q9DBS5 619 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Tacc2Q9JJG0 1149 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Mroh9G5E8L9 891 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 PurbO35295 324 aaKnown RBP17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 P4hbP09103 509 aaKnown RBP17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Hsd17b1P51656 344 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Nr1d1Q3UV55 615 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Lrrc55Q3UY51 311 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ankrd13dQ6PD24 605 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 PigsQ6PD26 555 aaKnown RBP17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ankrd24Q80VM7 985 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Als2cr12Q8BVM7 383 aa17.82■□□□□ 0.44
Trim28-201ENSMUST00000005705 Trerf1Q8BXJ2 1205 aa17.82■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms