RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USA1	YML029W	TAF14	P35189	244 aa		3.75	□□□□□ -1.81
USA1	YML029W	HES1	P35843	434 aa		3.75	□□□□□ -1.81
USA1	YML029W	KKQ8	P36004	724 aa		3.75	□□□□□ -1.81
USA1	YML029W	CUE2	P36075	443 aa	Known RBP	3.75	□□□□□ -1.81
USA1	YML029W	ASC1	P38011	319 aa	Known RBP	3.75	□□□□□ -1.81
USA1	YML029W	UBS1	P38290	277 aa		3.75	□□□□□ -1.81
USA1	YML029W	TSC10	P38342	320 aa		3.75	□□□□□ -1.81
USA1	YML029W	YJR120W	P47157	116 aa		3.75	□□□□□ -1.81
USA1	YML029W	GLO2	Q05584	274 aa		3.75	□□□□□ -1.81
USA1	YML029W	DIC1	Q06143	298 aa		3.75	□□□□□ -1.81
USA1	YML029W	YLR456W	Q06199	204 aa		3.75	□□□□□ -1.81
USA1	YML029W	ESA1	Q08649	445 aa		3.75	□□□□□ -1.81
USA1	YML029W	GPN2	Q08726	347 aa	Predicted RBP	3.75	□□□□□ -1.81
USA1	YML029W	GPB1	Q08886	897 aa		3.75	□□□□□ -1.81
USA1	YML029W	YDR262W	Q12331	272 aa		3.75	□□□□□ -1.81
USA1	YML029W	SAS5	Q99314	248 aa		3.75	□□□□□ -1.81
USA1	YML029W	STT4	P37297	1900 aa		3.75	□□□□□ -1.81
USA1	YML029W	FUM1	P08417	488 aa	Known RBP	3.75	□□□□□ -1.81
USA1	YML029W	COS2	P0CX12	379 aa		3.75	□□□□□ -1.81
USA1	YML029W	COS3	P0CX13	379 aa		3.75	□□□□□ -1.81
USA1	YML029W	GUK1	P15454	187 aa	Known RBP	3.75	□□□□□ -1.81
USA1	YML029W	OCA4	P25366	362 aa		3.75	□□□□□ -1.81
USA1	YML029W	GFD2	P25370	566 aa	Known RBP	3.75	□□□□□ -1.81
USA1	YML029W	CSM1	P25651	190 aa		3.75	□□□□□ -1.81
USA1	YML029W	BUB2	P26448	306 aa	Predicted RBP	3.75	□□□□□ -1.81
USA1	YML029W	CMK1	P27466	446 aa	Known RBP	3.75	□□□□□ -1.81
USA1	YML029W	SSE1	P32589	693 aa	Known RBP	3.75	□□□□□ -1.81
USA1	YML029W	MGM101	P32787	269 aa	Known RBP	3.75	□□□□□ -1.81
USA1	YML029W	YHL008C	P38750	627 aa		3.75	□□□□□ -1.81
USA1	YML029W	LRO1	P40345	661 aa		3.75	□□□□□ -1.81
USA1	YML029W	AYR1	P40471	297 aa		3.75	□□□□□ -1.81
USA1	YML029W	MAD2	P40958	196 aa		3.75	□□□□□ -1.81
USA1	YML029W	ZIM17	P42844	174 aa		3.75	□□□□□ -1.81
USA1	YML029W	COS4	P43542	379 aa		3.75	□□□□□ -1.81
USA1	YML029W	MPS3	P47069	682 aa		3.75	□□□□□ -1.81
USA1	YML029W	SAM37	P50110	327 aa		3.75	□□□□□ -1.81
USA1	YML029W	MIG2	P53035	382 aa		3.75	□□□□□ -1.81
USA1	YML029W	YDR124W	Q04608	324 aa		3.75	□□□□□ -1.81
USA1	YML029W	DAL4	Q04895	635 aa		3.75	□□□□□ -1.81
USA1	YML029W	DIA2	Q08496	732 aa	Predicted RBP	3.75	□□□□□ -1.81
USA1	YML029W	YLR049C	Q12110	428 aa		3.75	□□□□□ -1.81
USA1	YML029W	NSL1	Q12143	216 aa		3.75	□□□□□ -1.81
USA1	YML029W	PST1	Q12355	444 aa		3.75	□□□□□ -1.81
USA1	YML029W	SKM1	Q12469	655 aa		3.75	□□□□□ -1.81
USA1	YML029W	Q0010	Q9ZZX9	128 aa		3.75	□□□□□ -1.81
USA1	YML029W	TRP3	P00937	484 aa		3.74	□□□□□ -1.81
USA1	YML029W	GAL4	P04386	881 aa		3.74	□□□□□ -1.81
USA1	YML029W	CDC21	P06785	304 aa		3.74	□□□□□ -1.81
USA1	YML029W	RPL40A	P0CH08	128 aa	Known RBP	3.74	□□□□□ -1.81
USA1	YML029W	RPL40B	P0CH09	128 aa	Known RBP	3.74	□□□□□ -1.81
USA1	YML029W	PWP1	P21304	576 aa	Known RBP	3.74	□□□□□ -1.81
USA1	YML029W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
USA1	YML029W	ADE1	P27616	306 aa		3.74	□□□□□ -1.81
USA1	YML029W	CTS1	P29029	562 aa		3.74	□□□□□ -1.81
USA1	YML029W	OAR1	P35731	278 aa		3.74	□□□□□ -1.81
USA1	YML029W	VPS21	P36017	210 aa	Known RBP	3.74	□□□□□ -1.81
USA1	YML029W	EMC3	P36039	253 aa		3.74	□□□□□ -1.81
USA1	YML029W	MRPL15	P36523	253 aa		3.74	□□□□□ -1.81
USA1	YML029W	YRO2	P38079	344 aa		3.74	□□□□□ -1.81
USA1	YML029W	FZO1	P38297	855 aa		3.74	□□□□□ -1.81
USA1	YML029W	PIC2	P40035	300 aa		3.74	□□□□□ -1.81
USA1	YML029W	YFR020W	P43600	232 aa		3.74	□□□□□ -1.81
USA1	YML029W	STB2	P46679	850 aa		3.74	□□□□□ -1.81
USA1	YML029W	HOC1	P47124	396 aa		3.74	□□□□□ -1.81
USA1	YML029W	DIA3	P52290	468 aa		3.74	□□□□□ -1.81
USA1	YML029W	HST3	P53687	447 aa		3.74	□□□□□ -1.81
USA1	YML029W	IDP3	P53982	420 aa	Known RBP	3.74	□□□□□ -1.81
USA1	YML029W	MPS1	P54199	764 aa		3.74	□□□□□ -1.81
USA1	YML029W	REX2	P54964	269 aa	Known RBP	3.74	□□□□□ -1.81
USA1	YML029W	PRP38	Q00723	242 aa	Predicted RBP	3.74	□□□□□ -1.81
USA1	YML029W	ELP4	Q02884	456 aa	Known RBP	3.74	□□□□□ -1.81
USA1	YML029W	YET2	Q04210	160 aa		3.74	□□□□□ -1.81
USA1	YML029W	FAR10	Q06001	478 aa		3.74	□□□□□ -1.81
USA1	YML029W	CDA1	Q06702	301 aa		3.74	□□□□□ -1.81
USA1	YML029W	YEH2	Q07950	538 aa		3.74	□□□□□ -1.81
USA1	YML029W	NTG2	Q08214	380 aa		3.74	□□□□□ -1.81
USA1	YML029W	MCH5	Q08777	521 aa		3.74	□□□□□ -1.81
USA1	YML029W	CAN1	P04817	590 aa		3.74	□□□□□ -1.81
USA1	YML029W	RAP1	P11938	827 aa		3.74	□□□□□ -1.81
USA1	YML029W	MRPL33	P20084	86 aa		3.74	□□□□□ -1.81
USA1	YML029W	ATP7	P30902	174 aa		3.74	□□□□□ -1.81
USA1	YML029W	DGR2	P32330	852 aa		3.74	□□□□□ -1.81
USA1	YML029W	HXT4	P32467	576 aa		3.74	□□□□□ -1.81
USA1	YML029W	PTC1	P35182	281 aa		3.74	□□□□□ -1.81
USA1	YML029W	DOA1	P36037	715 aa		3.74	□□□□□ -1.81
USA1	YML029W	MTG2	P38860	518 aa		3.74	□□□□□ -1.81
USA1	YML029W	HXT6	P39003	570 aa	Known RBP	3.74	□□□□□ -1.81
USA1	YML029W	HXT7	P39004	570 aa		3.74	□□□□□ -1.81
USA1	YML029W	GTO1	P48239	356 aa		3.74	□□□□□ -1.81
USA1	YML029W	SDH1	Q00711	640 aa		3.74	□□□□□ -1.81
USA1	YML029W	YMR111C	Q04461	462 aa	Predicted RBP	3.74	□□□□□ -1.81
USA1	YML029W	RAD34	Q06665	692 aa		3.74	□□□□□ -1.81
USA1	YML029W	YPR202W	Q08993	238 aa		3.74	□□□□□ -1.81
USA1	YML029W	YPR096C	O13587	100 aa		3.73	□□□□□ -1.81
USA1	YML029W	HXK2	P04807	486 aa	Known RBP	3.73	□□□□□ -1.81
USA1	YML029W	STE7	P06784	515 aa		3.73	□□□□□ -1.81
USA1	YML029W	ARD1	P07347	238 aa	Predicted RBP	3.73	□□□□□ -1.81
USA1	YML029W	RPS21A	P0C0V8	87 aa	Known RBP	3.73	□□□□□ -1.81
USA1	YML029W	HOM3	P10869	527 aa		3.73	□□□□□ -1.81
USA1	YML029W	CMP2	P14747	604 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms