RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	ATG26	Q06321	1198 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	CUR1	Q06469	252 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	SUT2	Q12286	268 aa		4.16	□□□□□ -1.74
RKM3	YBR030W	NUP1	P20676	1076 aa		4.15	□□□□□ -1.75
RKM3	YBR030W	SAG1	P20840	650 aa		4.15	□□□□□ -1.75
RKM3	YBR030W	TFG2	P41896	400 aa	Predicted RBP	4.15	□□□□□ -1.75
RKM3	YBR030W	SNG1	P46950	547 aa		4.15	□□□□□ -1.75
RKM3	YBR030W	EKI1	Q03764	534 aa		4.15	□□□□□ -1.75
RKM3	YBR030W	SMA2	Q04658	369 aa		4.15	□□□□□ -1.75
RKM3	YBR030W	YOR365C	Q08844	703 aa		4.15	□□□□□ -1.75
RKM3	YBR030W	YIL002W-A	Q3E7Z5	69 aa		4.15	□□□□□ -1.75
RKM3	YBR030W	SCEI	P03882	235 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	MAK32	P23060	363 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	YCR006C	P25350	157 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	MSN2	P33748	704 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	YUH1	P35127	236 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	YBR139W	P38109	508 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	BNA4	P38169	460 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	EFM2	P38347	419 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	UBA4	P38820	440 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	GPI16	P38875	610 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	MNL1	P38888	796 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	STN1	P38960	494 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	ASN2	P49090	572 aa	Known RBP	4.14	□□□□□ -1.75
RKM3	YBR030W	ZPR1	P53303	486 aa	Known RBP	4.14	□□□□□ -1.75
RKM3	YBR030W	YGR266W	P53326	701 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	ASI1	P54074	624 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	KIN4	Q01919	800 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	MUK1	Q02866	612 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	IPK1	Q06667	281 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	YLR413W	Q06689	675 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	RRT8	Q08219	342 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	YOR389W	Q08912	624 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	SRN2	Q99176	213 aa		4.14	□□□□□ -1.75
RKM3	YBR030W	ADE4	P04046	510 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	RAD52	P06778	471 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	PRP21	P32524	280 aa	Predicted RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	EMP70	P32802	667 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	PTK1	P36002	662 aa	Predicted RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	OLA1	P38219	394 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	SMC2	P38989	1170 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	NUP84	P52891	726 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	DUG3	P53871	357 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	YMR206W	Q03695	313 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	STE23	Q06010	1027 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	YOR012W	Q12351	137 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	MRPL23	Q12487	163 aa	Predicted RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	CDC37	P06101	506 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	YMR085W	P0CF18	432 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	SNF3	P10870	884 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	HOM2	P13663	365 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	ATP11	P32453	318 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	SOR1	P35497	357 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	YKL023W	P36103	277 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	DUG2	P38149	878 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	SPT8	P38915	602 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	CCT2	P39076	527 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	LOC1	P43586	204 aa	Predicted RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	IMD3	P50095	523 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	PIB2	P53191	635 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	BUD32	P53323	261 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	SNU56	Q03782	492 aa	Known RBP	4.13	□□□□□ -1.75
RKM3	YBR030W	GIS1	Q03833	894 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	SOR2	Q07786	357 aa		4.13	□□□□□ -1.75
RKM3	YBR030W	PET18	P25362	215 aa		4.12	□□□□□ -1.75
RKM3	YBR030W	RRN10	P38204	145 aa		4.12	□□□□□ -1.75
RKM3	YBR030W	RRP4	P38792	359 aa	Known RBP	4.12	□□□□□ -1.75
RKM3	YBR030W	YIL060W	P40519	144 aa		4.12	□□□□□ -1.75
RKM3	YBR030W	SYG1	P40528	902 aa		4.12	□□□□□ -1.75
RKM3	YBR030W	TAX4	P47030	604 aa		4.12	□□□□□ -1.75
RKM3	YBR030W	YVH1	Q02256	364 aa	Known RBP	4.12	□□□□□ -1.75
RKM3	YBR030W	SMA1	Q02651	245 aa		4.12	□□□□□ -1.75
RKM3	YBR030W	AQY1	P0CD91	305 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	NFT1	P0CE68	1218 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	SAM1	P10659	382 aa	Known RBP	4.11	□□□□□ -1.75
RKM3	YBR030W	TYR1	P20049	452 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	PSO2	P30620	661 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	YSC83	P32792	385 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	OCT1	P35999	772 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	ATP3	P38077	311 aa	Known RBP	4.11	□□□□□ -1.75
RKM3	YBR030W	HSM3	P38348	480 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	AIM20	P40451	204 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	SMM1	P53720	384 aa	Known RBP	4.11	□□□□□ -1.75
RKM3	YBR030W	PIG1	Q06216	648 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	ULA1	Q12059	462 aa		4.11	□□□□□ -1.75
RKM3	YBR030W	BRR1	Q99177	341 aa	Predicted RBP	4.11	□□□□□ -1.75
RKM3	YBR030W	YPR089W	O13585	888 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	SUP35	P05453	685 aa	Known RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	HEM1	P09950	548 aa	Predicted RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	ERG11	P10614	530 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	GAL3	P13045	520 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	MSS51	P32335	436 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RKM3	YBR030W	ROT2	P38138	954 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	QDR3	P38227	689 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	SPP381	P38282	291 aa	Predicted RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	SPC97	P38863	823 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	GAT2	P40209	560 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	SAS2	P40963	338 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	PHO86	P46956	311 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms