RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 TSPYL2Q9H2G4 693 aaPredicted RBP19.59■□□□□ 0.73
PHGDH-234ENST00000642041 RIOX1Q9H6W3 641 aa19.59■□□□□ 0.73
PHGDH-234ENST00000642041 C6orf50Q9HD87 102 aa19.59■□□□□ 0.73
PHGDH-234ENST00000642041 EMILIN3Q9NT22 766 aa19.59■□□□□ 0.73
PHGDH-234ENST00000642041 TMEM63CQ9P1W3 806 aa19.59■□□□□ 0.73
PHGDH-234ENST00000642041 CHD7Q9P2D1 2997 aa19.58■□□□□ 0.73
PHGDH-234ENST00000642041 CUTAO60888 179 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 GADD45BO75293 160 aaPredicted RBP19.58■□□□□ 0.72
PHGDH-234ENST00000642041 JAG1P78504 1218 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 FAM160A1Q05DH4 1040 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 UVSSAQ2YD98 709 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 OLFML2BQ68BL8 750 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 MRPS27Q92552 414 aaKnown RBP19.58■□□□□ 0.72
PHGDH-234ENST00000642041 TIGD1Q96MW7 591 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 EPHX3Q9H6B9 360 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 BARHL2Q9NY43 387 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 CLIP2Q9UDT6 1046 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 REV3LO60673 3130 aa19.58■□□□□ 0.72
PHGDH-234ENST00000642041 KINO60870 393 aaKnown RBP19.57■□□□□ 0.72
PHGDH-234ENST00000642041 GDF11O95390 407 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 PLEKHA8P1O95397 391 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 CCDC192P0DO97 292 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 PDHBP11177 359 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 IGFBP4P22692 258 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 PBX2P40425 430 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 TMEM31Q5JXX7 168 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L2Q6R6M4 530 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 CCDC82Q8N4S0 544 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 GMCL1P1Q8NEA9 526 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 NAP1L4Q99733 375 aaKnown RBP19.57■□□□□ 0.72
PHGDH-234ENST00000642041 TSPY26PQ9H489 355 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 GRPEL1Q9HAV7 217 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 ARHGEF10LQ9HCE6 1279 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 ZBTB21Q9ULJ3 1066 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 PCDHA4Q9UN74 947 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 PHF24Q9UPV7 400 aa19.57■□□□□ 0.72
PHGDH-234ENST00000642041 PLXNA1Q9UIW2 1896 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 BTBD18B2RXH4 712 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 LAD1O00515 517 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 GH2P01242 217 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 ICA1Q05084 483 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 FAM173BQ6P4H8 233 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 ALYREFQ86V81 257 aaKnown RBP19.56■□□□□ 0.72
PHGDH-234ENST00000642041 TNMDQ9H2S6 317 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 TMEM39AQ9NV64 488 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 FAM13BQ9NYF5 915 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 PNMA2Q9UL42 364 aa19.56■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L15C9J2P7 530 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L13C9JLJ4 530 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L11C9JVI0 530 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L18D6R9N7 530 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L22D6RA61 530 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L17D6RBQ6 530 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L19D6RCP7 530 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L20D6RJB6 530 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 ZNF543Q08ER8 600 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 USP17L24Q0WX57 530 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 AAK1Q2M2I8 961 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 KANK3Q6NY19 840 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 DPP9Q86TI2 863 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 BLIDQ8IZY5 108 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 KRI1Q8N9T8 703 aaKnown RBP19.55■□□□□ 0.72
PHGDH-234ENST00000642041 GMCL1Q96IK5 515 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.55■□□□□ 0.72
PHGDH-234ENST00000642041 ZMYND12Q9H0C1 365 aa19.55■□□□□ 0.72
PHGDH-234ENST00000642041 FAM237AA0A1B0GTK4 181 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 GRXCR1A8MXD5 290 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 GUCY1A2P33402 732 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 FOSBP53539 338 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 SEPT2Q15019 361 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 LBX2Q6XYB7 198 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 KRT25Q7Z3Z0 450 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 SNX27Q96L92 541 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 C12orf42Q96LP6 360 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 CLSTN2Q9H4D0 955 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 PCDHA7Q9UN72 937 aa19.54■□□□□ 0.72
PHGDH-234ENST00000642041 PNMA6FA0A0J9YX94 578 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 KIF28PB7ZC32 967 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 PQBP1O60828 265 aaKnown RBP19.53■□□□□ 0.72
PHGDH-234ENST00000642041 RASIP1Q5U651 963 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 ARL6IP4Q66PJ3 421 aaKnown RBP19.53■□□□□ 0.72
PHGDH-234ENST00000642041 CATSPERGQ6ZRH7 1159 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 RBM43Q6ZSC3 357 aaKnown RBP19.53■□□□□ 0.72
PHGDH-234ENST00000642041 PGBD1Q96JS3 809 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 TOX2Q96NM4 488 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 AIFM3Q96NN9 605 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 GOPCQ9HD26 462 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 DACT1Q9NYF0 836 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 VPS54Q9P1Q0 977 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 BTBD7Q9P203 1132 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 USP25Q9UHP3 1055 aa19.53■□□□□ 0.72
PHGDH-234ENST00000642041 CCDC194A0A1B0GVG4 234 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 STRNO43815 780 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 PLA2G6O60733 806 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 GPR37L1O60883 481 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 MRPL12P52815 198 aaKnown RBP19.52■□□□□ 0.72
PHGDH-234ENST00000642041 CEBPZQ03701 1054 aaKnown RBP19.52■□□□□ 0.72
PHGDH-234ENST00000642041 FAAP100Q0VG06 881 aa19.52■□□□□ 0.72
PHGDH-234ENST00000642041 ZRSR1Q15695 479 aaKnown RBP19.52■□□□□ 0.72
PHGDH-234ENST00000642041 SHROOM1Q2M3G4 852 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms