RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	HLA-C	Q95604	372 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	ZKSCAN3	Q9BRR0	538 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	UBA5	Q9GZZ9	404 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	CD320	Q9NPF0	282 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	C11orf16	Q9NQ32	467 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	COL20A1	Q9P218	1284 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	COG5	Q9UP83	839 aa		11.72	□□□□□ -0.53
PHGDH-222	ENST00000641587	NEDD4	P46934	1319 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	WDR19	Q8NEZ3	1342 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	KIF28P	B7ZC32	967 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	HIP1	O00291	1037 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	NBN	O60934	754 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	MMP3	P08254	477 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	SNHG28	P0DPA3	235 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	KCNJ6	P48051	423 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	PTPN11	Q06124	597 aa	Predicted RBP	11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	ARHGAP1	Q07960	439 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	ALX1	Q15699	326 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	C8orf34	Q49A92	452 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	CCDC62	Q6P9F0	684 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	SEPT14	Q6ZU15	432 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	LRRC8D	Q7L1W4	858 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	WNT8B	Q93098	351 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	TAAR1	Q96RJ0	339 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	TCP11L1	Q9NUJ3	509 aa		11.71	□□□□□ -0.53
PHGDH-222	ENST00000641587	SI	P14410	1827 aa		11.71	□□□□□ -0.54
PHGDH-222	ENST00000641587	MYH6	P13533	1939 aa		11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	KPNA6	O60684	536 aa		11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	BAIAP3	O94812	1187 aa		11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	HSPD1	P10809	573 aa	Known RBP	11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	CHML	P26374	656 aa		11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	HOXD11	P31277	338 aa	Predicted RBP	11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	FAM117B	Q6P1L5	589 aa		11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	CAGE1	Q8TC20	777 aa		11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	AFAP1L1	Q8TED9	768 aa		11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	ZBED2	Q9BTP6	218 aa		11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	MYH7B	A7E2Y1	1941 aa		11.7	□□□□□ -0.54
PHGDH-222	ENST00000641587	SORBS3	O60504	671 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	GH1	P01241	217 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	ZNF286B	P0CG31	522 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	CKB	P12277	381 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	SELP	P16109	830 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	ZNF200	P98182	395 aa	Predicted RBP	11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	NMI	Q13287	307 aa	Predicted RBP	11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	HIC1	Q14526	733 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	CDC37	Q16543	378 aa	Predicted RBP	11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	CNKSR3	Q6P9H4	555 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	SESTD1	Q86VW0	696 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	RUFY2	Q8WXA3	655 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	MPHOSPH6	Q99547	160 aa	Known RBP	11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	ALG1	Q9BT22	464 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	SUGCT	Q9HAC7	445 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	HELLS	Q9NRZ9	838 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	HDAC6	Q9UBN7	1215 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	GTF2IRD1	Q9UHL9	959 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	LAMA4	Q16363	1823 aa		11.69	□□□□□ -0.54
PHGDH-222	ENST00000641587	LINC01553	A4QN01	128 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	GJB5	O95377	273 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	CXCL10	P02778	98 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	EIF2AK2	P19525	551 aa	Known RBP	11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	PSEN2	P49810	448 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	MFAP1	P55081	439 aa	Known RBP	11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	MBTPS1	Q14703	1052 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	MCMDC2	Q4G0Z9	681 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	TMEM31	Q5JXX7	168 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	TRAF7	Q6Q0C0	670 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	CWC27	Q6UX04	472 aa	Known RBP	11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	CCDC155	Q8N6L0	562 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	HCN4	Q9Y3Q4	1203 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	MICAL3	Q7RTP6	2002 aa		11.68	□□□□□ -0.54
PHGDH-222	ENST00000641587	ZMYM6	O95789	1325 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	CCDC171	Q6TFL3	1326 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	EIF5B	O60841	1220 aa	Known RBP	11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	CAST	P20810	708 aa	Known RBP	11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	RBL2	Q08999	1139 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	MFSD10	Q14728	455 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	TRIM71	Q2Q1W2	868 aa	Known RBP	11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	QRICH1	Q2TAL8	776 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	GPATCH4	Q5T3I0	446 aa	Known RBP	11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	ZNF618	Q5T7W0	954 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	MFSD6	Q6ZSS7	791 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	ADGRF4	Q8IZF3	695 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	TGS1	Q96RS0	853 aa	Known RBP	11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	RMDN3	Q96TC7	470 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	C17orf80	Q9BSJ5	609 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	ESYT1	Q9BSJ8	1104 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	BACH2	Q9BYV9	841 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	UBE2Z	Q9H832	354 aa	Predicted RBP	11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	UPF2	Q9HAU5	1272 aa	Known RBP	11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	DDX41	Q9UJV9	622 aa	Known RBP	11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	C5orf42	Q9H799	3197 aa		11.67	□□□□□ -0.54
PHGDH-222	ENST00000641587	ABCB11	O95342	1321 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	WDFY4	Q6ZS81	3184 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587		B4DLN1	442 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	F2	P00734	622 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	IL9	P15248	144 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	KCNA5	P22460	613 aa		11.66	□□□□□ -0.54
PHGDH-222	ENST00000641587	MRPL12	P52815	198 aa	Known RBP	11.66	□□□□□ -0.54

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