RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 NTRK3Q16288 839 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 C1orf53Q5VUE5 145 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 ANO1Q5XXA6 986 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 PCNX4Q63HM2 1172 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 KLHDC9Q8NEP7 349 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 WASF1Q92558 559 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 DPF3Q92784 378 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 GPKOWQ92917 476 aaPredicted RBP eCLIP16.07■□□□□ 0.164e-9■■■□□ 16.8
SNRPA1-216ENST00000626000 CDHR1Q96JP9 859 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 GLT1D1Q96MS3 346 aa16.07■□□□□ 0.16
SNRPA1-216ENST00000626000 MROH7Q68CQ1 1323 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 STK36Q9NRP7 1315 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 STXBP3O00186 592 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 MEIS2O14770 477 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 EVI5O60447 810 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 TXNP10599 105 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 SMPD1P17405 629 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 RABEP1Q15276 862 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 FSCN1Q16658 493 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 GNASQ5JWF2 1037 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 GJC2Q5T442 439 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 GALNT17Q6IS24 598 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 DIS3LQ8TF46 1054 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 SLC26A6Q9BXS9 759 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 POLR3EQ9NVU0 708 aa16.06■□□□□ 0.16
SNRPA1-216ENST00000626000 ELP1O95163 1332 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 SMCO2A6NFE2 343 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 ST18O60284 1047 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 GH1P01241 217 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 MYCLP12524 364 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 ACLYP53396 1101 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 PRPF38BQ5VTL8 546 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 USP17L6PQ6QN14 398 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 NLRX1Q86UT6 975 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 GIMAP8Q8ND71 665 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 EMID1Q96A84 441 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 SENP6Q9GZR1 1112 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 ZMYND12Q9H0C1 365 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 TPCN1Q9ULQ1 816 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 LIMCH1Q9UPQ0 1083 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 MRVI1Q9Y6F6 885 aa16.05■□□□□ 0.16
SNRPA1-216ENST00000626000 hCG_1642624A0A1W2PR95 340 aa16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 MAFGO15525 162 aa16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 DYNC1LI2O43237 492 aaPredicted RBP16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 FIBPO43427 364 aa16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 CCDC62Q6P9F0 684 aa16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 SEPT14Q6ZU15 432 aa16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 REXO1Q8N1G1 1221 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 OR6J1Q8NGC5 347 aa16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 PHKBQ93100 1093 aa16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 NCOA5Q9HCD5 579 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 STARD7Q9NQZ5 370 aa16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 PDGFCQ9NRA1 345 aa16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 SH2B1Q9NRF2 756 aaPredicted RBP16.04■□□□□ 0.16
SNRPA1-216ENST00000626000 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 ICAM3P32942 547 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 MCM2P49736 904 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 SCRN1Q12765 414 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 STK3Q13188 491 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 LAMC2Q13753 1193 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 SNX17Q15036 470 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 KCNA10Q16322 511 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 CCSAPQ6IQ19 270 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 GTF3C6Q969F1 213 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 GPRASP2Q96D09 838 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 INPP4AQ96PE3 977 aaPredicted RBP16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 PCDHA6Q9UN73 950 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 PCDHA8Q9Y5H6 950 aa16.03■□□□□ 0.16
SNRPA1-216ENST00000626000 A0A1W2PQ45 241 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 A0A1W2PQY0 241 aa16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 ADCY6O43306 1168 aa16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 ASGR1P07306 291 aa16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 NEDD9Q14511 834 aa16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 PKN1Q16512 942 aa16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 SLC39A5Q6ZMH5 540 aa16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 LENG1Q96BZ8 264 aaPredicted RBP16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 SENP7Q9BQF6 1050 aa16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 PCDH10Q9P2E7 1040 aa16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 DDX41Q9UJV9 622 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-216ENST00000626000 A0A0U1RQG5 324 aaPredicted RBP16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 A6NJR5 290 aa16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 SLC34A2O95436 690 aa16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 SREBF1P36956 1147 aa16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 CLK2P49760 499 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 NLRP5P59047 1200 aa16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 TOX2Q96NM4 488 aa16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 LLPHQ9BRT6 129 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 PRKAG2Q9UGJ0 569 aa16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 MKI67P46013 3256 aaKnown RBP16.01■□□□□ 0.15
SNRPA1-216ENST00000626000 CTAGE5O15320 804 aa16■□□□□ 0.15
SNRPA1-216ENST00000626000 UBE2SQ16763 222 aa16■□□□□ 0.15
SNRPA1-216ENST00000626000 ME3Q16798 604 aa16■□□□□ 0.15
SNRPA1-216ENST00000626000 TYW1BQ6NUM6 668 aa16■□□□□ 0.15
SNRPA1-216ENST00000626000 NIPA1Q7RTP0 329 aa16■□□□□ 0.15
SNRPA1-216ENST00000626000 IL31RAQ8NI17 732 aa16■□□□□ 0.15
SNRPA1-216ENST00000626000 PPTC7Q8NI37 304 aa16■□□□□ 0.15
SNRPA1-216ENST00000626000 VTI1AQ96AJ9 217 aa16■□□□□ 0.15
SNRPA1-216ENST00000626000 TBC1D32Q96NH3 1257 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms