RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 NDUFS2O75306 463 aa6.82□□□□□ -1.32
CDKL5-205ENST00000623535 GPC4O75487 556 aa6.82□□□□□ -1.32
CDKL5-205ENST00000623535 APOEP02649 317 aa6.82□□□□□ -1.32
CDKL5-205ENST00000623535 SLC27A3Q5K4L6 730 aa6.82□□□□□ -1.32
CDKL5-205ENST00000623535 CTAGE6Q86UF2 777 aa6.82□□□□□ -1.32
CDKL5-205ENST00000623535 MRPS27Q92552 414 aaKnown RBP6.82□□□□□ -1.32
CDKL5-205ENST00000623535 TADA1Q96BN2 335 aa6.82□□□□□ -1.32
CDKL5-205ENST00000623535 ALKBH8Q96BT7 664 aaKnown RBP6.82□□□□□ -1.32
CDKL5-205ENST00000623535 YME1L1Q96TA2 773 aa6.82□□□□□ -1.32
CDKL5-205ENST00000623535 EPS15L1Q9UBC2 864 aa6.82□□□□□ -1.32
CDKL5-205ENST00000623535 ADAMTS8Q9UP79 889 aa6.82□□□□□ -1.32
CDKL5-205ENST00000623535 PPP2R5EQ16537 467 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 NXNQ6DKJ4 435 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 CNPPD1Q9BV87 410 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PANK2Q9BZ23 570 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 ERICH4A6NGS2 130 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PAPOLAP51003 745 aaKnown RBP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 CEP85LQ5SZL2 805 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 LPIN2Q92539 896 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 CFAP74Q9C0B2 1584 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PHKA2P46019 1235 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 ALDH1A3P47895 512 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 BCL2L12Q9HB09 334 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 RASGRF2O14827 1237 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 HNRNPDLO14979 420 aaKnown RBP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 MAP4P27816 1152 aaKnown RBP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 MCM6Q14566 821 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 CCDC186Q7Z3E2 898 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 BANK1Q8NDB2 785 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PLBD2Q8NHP8 589 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 SNX29Q8TEQ0 813 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 MCUR1Q96AQ8 359 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 ASIC3Q9UHC3 531 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 CAPN7Q9Y6W3 813 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 DNAJC6O75061 913 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PYGBP11216 843 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 BRAPQ7Z569 592 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 SCN4BQ8IWT1 228 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 SEPT12Q8IYM1 358 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 TRPC7Q9HCX4 862 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 H7C1W4 665 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 DHX58Q96C10 678 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 MTBPQ96DY7 904 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 FANCFQ9NPI8 374 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 TJP2Q9UDY2 1190 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 ZC3H4Q9UPT8 1303 aaKnown RBP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 HUS1O60921 280 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 SKOR1P84550 965 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 AP1B1Q10567 949 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 ARHGEF7Q14155 803 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 KIZQ2M2Z5 673 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 RAPH1Q70E73 1250 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 FBXO18Q8NFZ0 1043 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 FAM71BQ8TC56 605 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PRPF4O43172 522 aaKnown RBP eCLIP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 MBD4O95243 580 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 CES1P23141 567 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PSMA4P25789 261 aaKnown RBP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 AKT1P31749 480 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 LMNB2Q03252 620 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PLD1Q13393 1074 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 CCDC144BQ3MJ40 725 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 IER5Q5VY09 327 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 TMC6Q7Z403 805 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 SPATA18Q8TC71 538 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 CHPF2Q9P2E5 772 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 MID2Q9UJV3 735 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 KDRP35968 1356 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 GCP02774 474 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 TUBBP07437 444 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PPP1R14AQ96A00 147 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 GSNP06396 782 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PCP11498 1178 aaKnown RBP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PPP2R3AQ06190 1150 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 LRRC23Q53EV4 343 aaPredicted RBP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 GALNT17Q6IS24 598 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 FAM178BQ8IXR5 827 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 LINS1Q8NG48 757 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 GIPC2Q8TF65 315 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 HSPH1Q92598 858 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 PSTPIP2Q9H939 334 aa6.81□□□□□ -1.32
CDKL5-205ENST00000623535 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.81□□□□□ -1.32
CDKL5-205ENST00000623535 STXBP3O00186 592 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 ALDH7A1P49419 539 aaKnown RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 IFNL1Q8IU54 200 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 UNC5CLQ8IV45 518 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 CUL7Q14999 1698 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 PYGMP11217 842 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 DCAF4L1Q3SXM0 396 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 ARSJQ5FYB0 599 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 HHATQ5VTY9 493 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 FBXO31Q5XUX0 539 aaPredicted RBP6.8□□□□□ -1.32
CDKL5-205ENST00000623535 FERMT3Q86UX7 667 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 BEST2Q8NFU1 509 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 CDC26Q8NHZ8 85 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 ARHGAP9Q9BRR9 750 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 NUP160Q12769 1436 aa6.8□□□□□ -1.32
CDKL5-205ENST00000623535 ERVK-10P10266 1014 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms