RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 MEIS2O14770 477 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 SORBS3O60504 671 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 CLTBP09497 229 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 CPT1AP50416 773 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 NAPAP54920 295 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 PSMC6P62333 389 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 CCT2P78371 535 aaKnown RBP16.59■□□□□ 0.25
TUBE1-204ENST00000603621 UBE2SQ16763 222 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 BRDTQ58F21 947 aaPredicted RBP16.59■□□□□ 0.25
TUBE1-204ENST00000603621 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 CCDC62Q6P9F0 684 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 VSIG10LQ86VR7 867 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 GDF15Q99988 308 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 RTEL1Q9NZ71 1219 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 LTBP2Q14767 1821 aa16.59■□□□□ 0.25
TUBE1-204ENST00000603621 CCDC196A0A1B0GTZ2 297 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 TRIM43BA6NCK2 446 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 DCDC2CA8MYV0 355 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 PPFIA3O75145 1194 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 CABYRO75952 493 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 GH1P01241 217 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 RCAN1P53805 252 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 CHMP4BP1P59074 171 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 FUT2Q10981 343 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 TOB2Q14106 344 aaPredicted RBP16.58■□□□□ 0.24
TUBE1-204ENST00000603621 TRIM43Q96BQ3 446 aaPredicted RBP16.58■□□□□ 0.24
TUBE1-204ENST00000603621 AGXT2Q9BYV1 514 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 UBE2OQ9C0C9 1292 aaKnown RBP16.58■□□□□ 0.24
TUBE1-204ENST00000603621 PDRG1Q9NUG6 133 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 TMEM39AQ9NV64 488 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 POLR3EQ9NVU0 708 aa16.58■□□□□ 0.24
TUBE1-204ENST00000603621 DDX41Q9UJV9 622 aaKnown RBP16.58■□□□□ 0.24
TUBE1-204ENST00000603621 PIK3CDO00329 1044 aa16.57■□□□□ 0.24
TUBE1-204ENST00000603621 RGS20O76081 388 aa16.57■□□□□ 0.24
TUBE1-204ENST00000603621 FAAP100Q0VG06 881 aa16.57■□□□□ 0.24
TUBE1-204ENST00000603621 ITGA7Q13683 1181 aa16.57■□□□□ 0.24
TUBE1-204ENST00000603621 ANKRD33Q7Z3H0 272 aa16.57■□□□□ 0.24
TUBE1-204ENST00000603621 FBXL16Q8N461 479 aa16.57■□□□□ 0.24
TUBE1-204ENST00000603621 AFG1LQ8WV93 481 aa16.57■□□□□ 0.24
TUBE1-204ENST00000603621 PRO3102Q9H379 93 aa16.57■□□□□ 0.24
TUBE1-204ENST00000603621 NCOA5Q9HCD5 579 aaKnown RBP16.57■□□□□ 0.24
TUBE1-204ENST00000603621 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 TLR3O15455 904 aaKnown RBP16.56■□□□□ 0.24
TUBE1-204ENST00000603621 SEC24BO95487 1268 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 PDIA3P30101 505 aaKnown RBP16.56■□□□□ 0.24
TUBE1-204ENST00000603621 CDK7P50613 346 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 MRPS9P82933 396 aaKnown RBP16.56■□□□□ 0.24
TUBE1-204ENST00000603621 PURAQ00577 322 aaKnown RBP16.56■□□□□ 0.24
TUBE1-204ENST00000603621 ARHGAP1Q07960 439 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 STK3Q13188 491 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 DHX37Q8IY37 1157 aaKnown RBP16.56■□□□□ 0.24
TUBE1-204ENST00000603621 PPP1R13LQ8WUF5 828 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 BADQ92934 168 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 PHKBQ93100 1093 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 TOX2Q96NM4 488 aa16.56■□□□□ 0.24
TUBE1-204ENST00000603621 MTG1Q9BT17 334 aaPredicted RBP16.56■□□□□ 0.24
TUBE1-204ENST00000603621 GRIN2DO15399 1336 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 A6NJR5 290 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 SPDYE3A6NKU9 549 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 STXBP3O00186 592 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 MMP3P08254 477 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 RAG1P15918 1043 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 BMP8BP34820 402 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 AKAP17AQ02040 695 aaKnown RBP16.55■□□□□ 0.24
TUBE1-204ENST00000603621 SLC26A6Q9BXS9 759 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 PCDHA6Q9UN73 950 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 PCDHA8Q9Y5H6 950 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 SCN10AQ9Y5Y9 1956 aa16.55■□□□□ 0.24
TUBE1-204ENST00000603621 RANBP2P49792 3224 aaKnown RBP16.55■□□□□ 0.24
TUBE1-204ENST00000603621 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 SMCO2A6NFE2 343 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 GGPS1O95749 300 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 ITGB8P26012 769 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 ADCY7P51828 1080 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 SP2Q02086 613 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 PFKFB3Q16875 520 aaPredicted RBP16.54■□□□□ 0.24
TUBE1-204ENST00000603621 GNPTABQ3T906 1256 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 FAM47CQ5HY64 1035 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 PCNX4Q63HM2 1172 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 KCNV1Q6PIU1 500 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 FAM126BQ8IXS8 530 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 PGBD1Q96JS3 809 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 BARHL2Q9NY43 387 aa16.54■□□□□ 0.24
TUBE1-204ENST00000603621 NID2Q14112 1375 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 hCG_1984214I3L0E3 225 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 KIAA0355O15063 1070 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 PRPF3O43395 683 aaKnown RBP16.53■□□□□ 0.24
TUBE1-204ENST00000603621 KPNA6O60684 536 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 EIF5BO60841 1220 aaKnown RBP16.53■□□□□ 0.24
TUBE1-204ENST00000603621 SCG2P13521 617 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 UBA1P22314 1058 aaKnown RBP16.53■□□□□ 0.24
TUBE1-204ENST00000603621 EVCP57679 992 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 LAMC2Q13753 1193 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 NBPF20Q3BBV1 942 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 PPP1R18Q6NYC8 613 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 ZNF713Q8N859 430 aaPredicted RBP16.53■□□□□ 0.24
TUBE1-204ENST00000603621 SLC43A3Q8NBI5 491 aa16.53■□□□□ 0.24
TUBE1-204ENST00000603621 PPP1R12CQ9BZL4 782 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms