RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 MICAL3Q7RTP6 2002 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 HIP1O00291 1037 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 CFBP00751 764 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 EIF2AK2P19525 551 aaKnown RBP12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 KCNJ6P48051 423 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 AAMPQ13685 434 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 IMMTQ16891 758 aaKnown RBP12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 GDF6Q6KF10 455 aaPredicted RBP12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 ENAHQ8N8S7 591 aaPredicted RBP12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 CAGE1Q8TC20 777 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 ARNTL2Q8WYA1 636 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 ANKS1AQ92625 1134 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 ALG1Q9BT22 464 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 KRT23Q9C075 422 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 OSBPL3Q9H4L5 887 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 COL20A1Q9P218 1284 aa12.32□□□□□ -0.44
CHMP2A-202ENST00000596708 NR3C2P08235 984 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 ARHGAP1Q07960 439 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 DGKDQ16760 1214 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 IFIT1BQ5T764 474 aaKnown RBP12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 AFAP1L1Q8TED9 768 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 KAT2BQ92831 832 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 UBAC1Q9BSL1 405 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 JMJD4Q9H9V9 463 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 CTNNA3Q9UI47 895 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 DDX41Q9UJV9 622 aaKnown RBP12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 MTCH2Q9Y6C9 303 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 MRVI1Q9Y6F6 885 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 SIP14410 1827 aa12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 SPTBN5Q9NRC6 3674 aaKnown RBP12.31□□□□□ -0.44
CHMP2A-202ENST00000596708 COL4A4P53420 1690 aaPredicted RBP12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 TLL1O43897 1013 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 EIF3JO75822 258 aaKnown RBP12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 BAIAP3O94812 1187 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 IGHDP01880 384 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 MYCLP12524 364 aaPredicted RBP12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 SELPP16109 830 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 COL9A1P20849 921 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 PSEN2P49810 448 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 NUCB1Q02818 461 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 TAP1Q03518 808 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 LAMC2Q13753 1193 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 AAK1Q2M2I8 961 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 LRRC8DQ7L1W4 858 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 SESTD1Q86VW0 696 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 DHX37Q8IY37 1157 aaKnown RBP12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 C7orf31Q8N865 590 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 KATNAL1Q9BW62 490 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 AMNQ9BXJ7 453 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 CNNM2Q9H8M5 875 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 PXMP2Q9NR77 195 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 HDAC6Q9UBN7 1215 aa12.3□□□□□ -0.44
CHMP2A-202ENST00000596708 BRWD1Q9NSI6 2320 aa12.29□□□□□ -0.44
CHMP2A-202ENST00000596708 EPOPA6NHQ4 379 aa12.29□□□□□ -0.44
CHMP2A-202ENST00000596708 PARNO95453 639 aaKnown RBP12.29□□□□□ -0.44
CHMP2A-202ENST00000596708 TFF2Q03403 129 aa12.29□□□□□ -0.44
CHMP2A-202ENST00000596708 KRT40Q6A162 431 aa12.29□□□□□ -0.44
CHMP2A-202ENST00000596708 STAG2Q8N3U4 1231 aa12.29□□□□□ -0.44
CHMP2A-202ENST00000596708 GTF2IRD1Q9UHL9 959 aa12.29□□□□□ -0.44
CHMP2A-202ENST00000596708 NLRC5Q86WI3 1866 aa12.29□□□□□ -0.44
CHMP2A-202ENST00000596708 KLRF2D3W0D1 207 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 SORBS3O60504 671 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 ARHGEF15O94989 841 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 ZNF286BP0CG31 522 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 CKBP12277 381 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 BMP1P13497 986 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 POU3F3P20264 500 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 KCNQ1P51787 676 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 WDR5P61964 334 aaKnown RBP12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 MFSD10Q14728 455 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 KIAA0753Q2KHM9 967 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 CNKSR3Q6P9H4 555 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 TMCO2Q7Z6W1 182 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 DHX38Q92620 1227 aaKnown RBP12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 CTAGE1Q96RT6 745 aa12.28□□□□□ -0.44
CHMP2A-202ENST00000596708 ZBTB5O15062 677 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 NBNO60934 754 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 HSD17B4P51659 736 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 DEFB103AP81534 67 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 TRDNQ13061 729 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 PTK7Q13308 1070 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 GRB10Q13322 594 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 GPNMBQ14956 572 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 KCNV1Q6PIU1 500 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 HOMER1Q86YM7 354 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 PPTC7Q8NI37 304 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 EXOC6Q8TAG9 804 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 EMID1Q96A84 441 aaPredicted RBP12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 YTHDC1Q96MU7 727 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 PDCD2LQ9BRP1 358 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 MAP3K20Q9NYL2 800 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 COG5Q9UP83 839 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 LOXHD1Q8IVV2 1947 aa12.27□□□□□ -0.45
CHMP2A-202ENST00000596708 ABHD14A-ACY1A0A1B0GW23 586 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms