RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PTGISQ16647 500 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 SEPT14Q6ZU15 432 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 SKAP1Q86WV1 359 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 FBXO11Q86XK2 927 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 CCDC155Q8N6L0 562 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 KAT2BQ92831 832 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 EMID1Q96A84 441 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 KRT23Q9C075 422 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 TSPYL2Q9H2G4 693 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 JMJD4Q9H9V9 463 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 MUC3AQ02505 3323 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 LAMA4Q16363 1823 aa20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 GBF1Q92538 1859 aa20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 EIF3JO75822 258 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 CASTP20810 708 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 GHRHRQ02643 423 aa20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 RBL2Q08999 1139 aa20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 AFAP1L1Q8TED9 768 aa20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 FTOQ9C0B1 505 aaKnown RBP eCLIP20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 IL25Q9H293 177 aa20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 CNNM2Q9H8M5 875 aa20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 DDX41Q9UJV9 622 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-203ENST00000594298 DGKDQ16760 1214 aa20.4■□□□□ 0.86
SHKBP1-203ENST00000594298 ARHGEF16Q5VV41 709 aa20.4■□□□□ 0.86
SHKBP1-203ENST00000594298 GDF6Q6KF10 455 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-203ENST00000594298 HERC6Q8IVU3 1022 aa20.4■□□□□ 0.86
SHKBP1-203ENST00000594298 ADAMTS19Q8TE59 1207 aa20.4■□□□□ 0.86
SHKBP1-203ENST00000594298 ESYT1Q9BSJ8 1104 aa20.4■□□□□ 0.86
SHKBP1-203ENST00000594298 UBAC1Q9BSL1 405 aa20.4■□□□□ 0.86
SHKBP1-203ENST00000594298 PXMP2Q9NR77 195 aa20.4■□□□□ 0.86
SHKBP1-203ENST00000594298 CHD7Q9P2D1 2997 aa20.4■□□□□ 0.86
SHKBP1-203ENST00000594298 DHX16O60231 1041 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 CDC45O75419 566 aa20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 PARNO95453 639 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 HSD17B4P51659 736 aa20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 MTMR8Q96EF0 704 aa20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 AMNQ9BXJ7 453 aa20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 MAP3K20Q9NYL2 800 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 GTF2IRD1Q9UHL9 959 aa20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 MTCH2Q9Y6C9 303 aa20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 TTC28Q96AY4 2481 aa20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 TANC1Q9C0D5 1861 aa20.39■□□□□ 0.85
SHKBP1-203ENST00000594298 KIF28PB7ZC32 967 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 OPLAHO14841 1288 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 NR3C2P08235 984 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 SELPP16109 830 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 EIF2AK2P19525 551 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 CHMP4BP1P59074 171 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 PTH1RQ03431 593 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 TAP1Q03518 808 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 TRDNQ13061 729 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 LAMC2Q13753 1193 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 GPNMBQ14956 572 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 SAMD3Q8N6K7 520 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 PPTC7Q8NI37 304 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 DHX38Q92620 1227 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 MAP4K1Q92918 833 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 UHRF1Q96T88 793 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 KATNAL1Q9BW62 490 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 VAT1LQ9HCJ6 419 aa20.38■□□□□ 0.85
SHKBP1-203ENST00000594298 GTPBP6O43824 516 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 F2P00734 622 aa20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 CFBP00751 764 aa20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 SEC23AQ15436 765 aa20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 IFIT1BQ5T764 474 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 LRRC8DQ7L1W4 858 aa20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 CHST3Q7LGC8 479 aa20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 MICALL1Q8N3F8 863 aa20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 STAG2Q8N3U4 1231 aa20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 IL27Q8NEV9 243 aa20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 MRVI1Q9Y6F6 885 aa20.37■□□□□ 0.85
SHKBP1-203ENST00000594298 SCN5AQ14524 2016 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 EPOPA6NHQ4 379 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 HAS3O00219 553 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 RFXAPO00287 272 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 CXCL10P02778 98 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 HOXD8P13378 290 aaPredicted RBP20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 AAK1Q2M2I8 961 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 STOX1Q6ZVD7 989 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 C7orf31Q8N865 590 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 PDCD2LQ9BRP1 358 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 HDAC6Q9UBN7 1215 aa20.36■□□□□ 0.85
SHKBP1-203ENST00000594298 PALM3A6NDB9 673 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 KLRF2D3W0D1 207 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 ZBTB5O15062 677 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 PPP1R11O60927 126 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 ARHGEF15O94989 841 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 CKBP12277 381 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 BMP1P13497 986 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 KCNJ6P48051 423 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 PSEN2P49810 448 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 WDR5P61964 334 aaKnown RBP20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 CNKSR3Q6P9H4 555 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 KCNV1Q6PIU1 500 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 DHX37Q8IY37 1157 aaKnown RBP20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 CERS4Q9HA82 394 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 MAD2L2Q9UI95 211 aa20.35■□□□□ 0.85
SHKBP1-203ENST00000594298 TLL1O43897 1013 aa20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 NBNO60934 754 aa20.34■□□□□ 0.85
SHKBP1-203ENST00000594298 RGS20O76081 388 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms