RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
SMAD4-214ENST00000592186 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
SMAD4-214ENST00000592186 NRBP1Q9UHY1 535 aa12.13□□□□□ -0.47
SMAD4-214ENST00000592186 CFAP45Q9UL16 551 aa12.13□□□□□ -0.47
SMAD4-214ENST00000592186 CEP131Q9UPN4 1083 aa12.13□□□□□ -0.47
SMAD4-214ENST00000592186 ZDHHC9Q9Y397 364 aa12.13□□□□□ -0.47
SMAD4-214ENST00000592186 MEIS1O00470 390 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 FOXN1O15353 648 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 ECM2O94769 699 aaPredicted RBP12.12□□□□□ -0.47
SMAD4-214ENST00000592186 BMP15O95972 392 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 TGFB3P10600 412 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 MYCLP12524 364 aaPredicted RBP12.12□□□□□ -0.47
SMAD4-214ENST00000592186 PRKCZQ05513 592 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 PKN2Q16513 984 aaKnown RBP12.12□□□□□ -0.47
SMAD4-214ENST00000592186 LETM2Q2VYF4 491 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 CEP55Q53EZ4 464 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 EARS2Q5JPH6 523 aaKnown RBP12.12□□□□□ -0.47
SMAD4-214ENST00000592186 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 NPLOC4Q8TAT6 608 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 RAET1EQ8TD07 263 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 PGBD1Q96JS3 809 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 MXRA8Q9BRK3 442 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 ABHD16BQ9H3Z7 469 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 GABRQQ9UN88 632 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 CNPY2Q9Y2B0 182 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 TRIM17Q9Y577 477 aa12.12□□□□□ -0.47
SMAD4-214ENST00000592186 LAD1O00515 517 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 CCNT1O60563 726 aaKnown RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 TOB1P50616 345 aaPredicted RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 MRPS9P82933 396 aaKnown RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 SETQ01105 290 aaPredicted RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 Q4G0T1 1027 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 TTC38Q5R3I4 469 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 FOXD4L5Q5VV16 416 aaPredicted RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 ARMCX2Q7L311 632 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 OTOP1Q7RTM1 612 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 FOXD4L4Q8WXT5 416 aaPredicted RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 GPRASP2Q96D09 838 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 FGD4Q96M96 766 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 MBOAT7Q96N66 472 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 VTA1Q9NP79 307 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 JADE2Q9NQC1 790 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 UBIAD1Q9Y5Z9 338 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 ASTN1O14525 1302 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 ZNF236Q9UL36 1845 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 PCNTO95613 3336 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 TBX3O15119 743 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 ADCY3O60266 1144 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 BAG4O95429 457 aaKnown RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 IGHA2P01877 340 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 LBX1P52954 281 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 UBXN2AP68543 259 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 MTMR1Q13613 665 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 IQSEC1Q6DN90 963 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 CTU1Q7Z7A3 348 aaKnown RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 SLAIN1Q8ND83 568 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 FAM20AQ96MK3 541 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 INPP4AQ96PE3 977 aaPredicted RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 RTEL1Q9NZ71 1219 aa12.11□□□□□ -0.47
SMAD4-214ENST00000592186 DDX25Q9UHL0 483 aaKnown RBP12.11□□□□□ -0.47
SMAD4-214ENST00000592186 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 SPATA31C2B4DYI2 1134 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 FIBPO43427 364 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 MARCH6O60337 910 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 NEMFO60524 1076 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 SNAI1O95863 264 aaPredicted RBP12.1□□□□□ -0.47
SMAD4-214ENST00000592186 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 ITGB5P18084 799 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 ICAM3P32942 547 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 KRT85P78386 507 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 ACVR2BQ13705 512 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 ZNF174Q15697 407 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 PRR16Q569H4 304 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 PLA2G4DQ86XP0 818 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 SLFN12Q8IYM2 578 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 IL31RAQ8NI17 732 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 SCFD2Q8WU76 684 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 SCAND2PQ9GZW5 306 aaPredicted RBP12.1□□□□□ -0.47
SMAD4-214ENST00000592186 PRDM10Q9NQV6 1147 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 PTPN22Q9Y2R2 807 aa12.1□□□□□ -0.47
SMAD4-214ENST00000592186 MORC2Q9Y6X9 1032 aaPredicted RBP12.1□□□□□ -0.47
SMAD4-214ENST00000592186 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 IGLV3-22A0A075B6J6 115 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 RBM47A0AV96 593 aaKnown RBP12.09□□□□□ -0.47
SMAD4-214ENST00000592186 EDIL3O43854 480 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 HMGCRP04035 888 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 GRK4P32298 578 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 MCM7P33993 719 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 CAP1Q01518 475 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 CCL14Q16627 93 aa12.09□□□□□ -0.47
SMAD4-214ENST00000592186 ARL6IP4Q66PJ3 421 aaKnown RBP12.09□□□□□ -0.47
SMAD4-214ENST00000592186 SEPT14Q6ZU15 432 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms