RNA–Protein interactions for RNA: ENST00000591648.1

TPGS2-216, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 2

Gene TPGS2, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-216ENST00000591648 MAP3K14Q99558 947 aa29.83■■■□□ 2.37
TPGS2-216ENST00000591648 SPZ1Q9BXG8 430 aa29.83■■■□□ 2.37
TPGS2-216ENST00000591648 MTMR10Q9NXD2 777 aa29.83■■■□□ 2.37
TPGS2-216ENST00000591648 DDX41Q9UJV9 622 aaKnown RBP29.83■■■□□ 2.37
TPGS2-216ENST00000591648 CYP2C9P11712 490 aa29.82■■■□□ 2.36
TPGS2-216ENST00000591648 ADCK5Q3MIX3 580 aa29.82■■■□□ 2.36
TPGS2-216ENST00000591648 TMTC2Q8N394 836 aa29.82■■■□□ 2.36
TPGS2-216ENST00000591648 TMEM199Q8N511 208 aa29.82■■■□□ 2.36
TPGS2-216ENST00000591648 NEK1Q96PY6 1258 aa29.82■■■□□ 2.36
TPGS2-216ENST00000591648 SLC12A7Q9Y666 1083 aa29.82■■■□□ 2.36
TPGS2-216ENST00000591648 RGS20O76081 388 aa29.81■■■□□ 2.36
TPGS2-216ENST00000591648 MMP3P08254 477 aa29.81■■■□□ 2.36
TPGS2-216ENST00000591648 LIFRP42702 1097 aa29.81■■■□□ 2.36
TPGS2-216ENST00000591648 TRAF1Q13077 416 aa29.81■■■□□ 2.36
TPGS2-216ENST00000591648 PPIGQ13427 754 aaKnown RBP eCLIP29.81■■■□□ 2.36
TPGS2-216ENST00000591648 MICU3Q86XE3 530 aa29.81■■■□□ 2.36
TPGS2-216ENST00000591648 NOC4LQ9BVI4 516 aaKnown RBP29.81■■■□□ 2.36
TPGS2-216ENST00000591648 MAP3K20Q9NYL2 800 aaKnown RBP29.81■■■□□ 2.36
TPGS2-216ENST00000591648 SEC63Q9UGP8 760 aaKnown RBP29.8■■■□□ 2.36
TPGS2-216ENST00000591648 TMEM240Q5SV17 173 aa29.79■■■□□ 2.36
TPGS2-216ENST00000591648 VSIG10LQ86VR7 867 aa29.79■■■□□ 2.36
TPGS2-216ENST00000591648 GPKOWQ92917 476 aaPredicted RBP eCLIP29.79■■■□□ 2.36
TPGS2-216ENST00000591648 SEZ6LQ9BYH1 1024 aa29.79■■■□□ 2.36
TPGS2-216ENST00000591648 WNT8AQ9H1J5 351 aa29.79■■■□□ 2.36
TPGS2-216ENST00000591648 CCND2P30279 289 aa29.78■■■□□ 2.36
TPGS2-216ENST00000591648 FAM109BQ6ICB4 259 aaPredicted RBP29.78■■■□□ 2.36
TPGS2-216ENST00000591648 USP17L6PQ6QN14 398 aa29.78■■■□□ 2.36
TPGS2-216ENST00000591648 ZNF365Q70YC5 407 aa29.78■■■□□ 2.36
TPGS2-216ENST00000591648 SAMD3Q8N6K7 520 aa29.78■■■□□ 2.36
TPGS2-216ENST00000591648 SCLYQ96I15 445 aa29.78■■■□□ 2.36
TPGS2-216ENST00000591648 LZTS2Q9BRK4 669 aa29.78■■■□□ 2.36
TPGS2-216ENST00000591648 KIAA1217Q5T5P2 1943 aa29.77■■■□□ 2.36
TPGS2-216ENST00000591648 KPNA6O60684 536 aa29.77■■■□□ 2.36
TPGS2-216ENST00000591648 CALM1P0DP23 149 aa29.77■■■□□ 2.36
TPGS2-216ENST00000591648 CALM2P0DP24 149 aa29.77■■■□□ 2.36
TPGS2-216ENST00000591648 CALM3P0DP25 149 aa29.77■■■□□ 2.36
TPGS2-216ENST00000591648 GNAQP50148 359 aa29.77■■■□□ 2.36
TPGS2-216ENST00000591648 DHX37Q8IY37 1157 aaKnown RBP29.77■■■□□ 2.36
TPGS2-216ENST00000591648 FANCBQ8NB91 859 aa29.77■■■□□ 2.36
TPGS2-216ENST00000591648 CPA1P15085 419 aa29.76■■■□□ 2.35
TPGS2-216ENST00000591648 SMAD3P84022 425 aaKnown RBP29.76■■■□□ 2.35
TPGS2-216ENST00000591648 EXOSC10Q01780 885 aaKnown RBP29.76■■■□□ 2.35
TPGS2-216ENST00000591648 SP2Q02086 613 aa29.76■■■□□ 2.35
TPGS2-216ENST00000591648 ZNF697Q5TEC3 545 aa29.76■■■□□ 2.35
TPGS2-216ENST00000591648 IL23AQ9NPF7 189 aa29.76■■■□□ 2.35
TPGS2-216ENST00000591648 SMARCA1P28370 1054 aa29.75■■■□□ 2.35
TPGS2-216ENST00000591648 TMTC3Q6ZXV5 915 aa29.75■■■□□ 2.35
TPGS2-216ENST00000591648 SGMS1Q86VZ5 419 aa29.75■■■□□ 2.35
TPGS2-216ENST00000591648 SMARCC2Q8TAQ2 1214 aa29.75■■■□□ 2.35
TPGS2-216ENST00000591648 KAT2BQ92831 832 aa29.75■■■□□ 2.35
TPGS2-216ENST00000591648 GUCD1Q96NT3 240 aa29.75■■■□□ 2.35
TPGS2-216ENST00000591648 RTEL1Q9NZ71 1219 aa29.75■■■□□ 2.35
TPGS2-216ENST00000591648 BRPF3Q9ULD4 1205 aa29.75■■■□□ 2.35
TPGS2-216ENST00000591648 CDH23Q9H251 3354 aa29.75■■■□□ 2.35
TPGS2-216ENST00000591648 SCN10AQ9Y5Y9 1956 aa29.74■■■□□ 2.35
TPGS2-216ENST00000591648 ZNF286BP0CG31 522 aa29.74■■■□□ 2.35
TPGS2-216ENST00000591648 NFRKBQ6P4R8 1299 aa29.74■■■□□ 2.35
TPGS2-216ENST00000591648 DHX32Q7L7V1 743 aaKnown RBP29.74■■■□□ 2.35
TPGS2-216ENST00000591648 BCAS3Q9H6U6 928 aa29.74■■■□□ 2.35
TPGS2-216ENST00000591648 GRXCR1A8MXD5 290 aa29.73■■■□□ 2.35
TPGS2-216ENST00000591648 MEIS2O14770 477 aa29.73■■■□□ 2.35
TPGS2-216ENST00000591648 GGPS1O95749 300 aa29.73■■■□□ 2.35
TPGS2-216ENST00000591648 NEFLP07196 543 aa29.73■■■□□ 2.35
TPGS2-216ENST00000591648 SUPT20HL2P0C7V6 817 aa29.73■■■□□ 2.35
TPGS2-216ENST00000591648 CASTP20810 708 aaKnown RBP29.73■■■□□ 2.35
TPGS2-216ENST00000591648 UBA1P22314 1058 aaKnown RBP29.73■■■□□ 2.35
TPGS2-216ENST00000591648 MRPS9P82933 396 aaKnown RBP29.73■■■□□ 2.35
TPGS2-216ENST00000591648 LAMC2Q13753 1193 aa29.73■■■□□ 2.35
TPGS2-216ENST00000591648 DGKDQ16760 1214 aa29.73■■■□□ 2.35
TPGS2-216ENST00000591648 APOA5Q6Q788 366 aa29.73■■■□□ 2.35
TPGS2-216ENST00000591648 SYNE3Q6ZMZ3 975 aa29.73■■■□□ 2.35
TPGS2-216ENST00000591648 TSGA10IPQ3SY00 556 aa29.72■■■□□ 2.35
TPGS2-216ENST00000591648 CELF3Q5SZQ8 465 aaKnown RBP29.72■■■□□ 2.35
TPGS2-216ENST00000591648 PSRC1Q6PGN9 363 aaPredicted RBP29.72■■■□□ 2.35
TPGS2-216ENST00000591648 CUL5Q93034 780 aa29.72■■■□□ 2.35
TPGS2-216ENST00000591648 EMID1Q96A84 441 aaPredicted RBP29.72■■■□□ 2.35
TPGS2-216ENST00000591648 SPATA33Q96N06 139 aa29.72■■■□□ 2.35
TPGS2-216ENST00000591648 ALG1Q9BT22 464 aa29.72■■■□□ 2.35
TPGS2-216ENST00000591648 TTYH1Q9H313 450 aaPredicted RBP29.72■■■□□ 2.35
TPGS2-216ENST00000591648 CXXC1Q9P0U4 656 aaPredicted RBP29.72■■■□□ 2.35
TPGS2-216ENST00000591648 RBAK-RBAKDNI3L0D1 243 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 UBE2SQ16763 222 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 HSDL1Q3SXM5 330 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 MYSM1Q5VVJ2 828 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 OTOP2Q7RTS6 562 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 HEATR3Q7Z4Q2 680 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 PPTC7Q8NI37 304 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 SEMA6BQ9H3T3 888 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 NAP1L2Q9ULW6 460 aaPredicted RBP29.71■■■□□ 2.35
TPGS2-216ENST00000591648 NOD1Q9Y239 953 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 FRMPD4Q14CM0 1322 aa29.71■■■□□ 2.35
TPGS2-216ENST00000591648 FGBP02675 491 aa29.7■■■□□ 2.35
TPGS2-216ENST00000591648 KRT32Q14532 448 aa29.7■■■□□ 2.35
TPGS2-216ENST00000591648 GDF6Q6KF10 455 aaPredicted RBP29.7■■■□□ 2.35
TPGS2-216ENST00000591648 DEFB128Q7Z7B8 93 aa29.7■■■□□ 2.35
TPGS2-216ENST00000591648 VWCEQ96DN2 955 aa29.7■■■□□ 2.35
TPGS2-216ENST00000591648 PSTPIP2Q9H939 334 aa29.7■■■□□ 2.35
TPGS2-216ENST00000591648 KLF18A0A0U1RQI7 1052 aa29.69■■■□□ 2.34
TPGS2-216ENST00000591648 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.69■■■□□ 2.34
TPGS2-216ENST00000591648 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms