RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 SETQ01105 290 aaPredicted RBP12.86□□□□□ -0.35
SMAD4-205ENST00000588745 PABPC4Q13310 644 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMAD4-205ENST00000588745 SNAPC2Q13487 334 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 NAALADL2Q58DX5 795 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 NSMFQ6X4W1 530 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 GRAMD1CQ8IYS0 662 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 SLC10A4Q96EP9 437 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 PAGE5Q96GU1 130 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 MAF1Q9H063 256 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 CUEDC2Q9H467 287 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 ACAD9Q9H845 621 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 A0A087WWV3 80 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 NLRP12P59046 1061 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 PLS1Q14651 629 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 UVSSAQ2YD98 709 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 NT5DC1Q5TFE4 455 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 RRAGBQ5VZM2 374 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
SMAD4-205ENST00000588745 C2orf69Q8N8R5 385 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 SNX29Q8TEQ0 813 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 ZNF526Q8TF50 670 aaPredicted RBP12.85□□□□□ -0.35
SMAD4-205ENST00000588745 SMARCE1Q969G3 411 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 GJA10Q969M2 543 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 CALML4Q96GE6 196 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 FAM20AQ96MK3 541 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 MMTAG2Q9BU76 263 aaKnown RBP12.85□□□□□ -0.35
SMAD4-205ENST00000588745 ASCC2Q9H1I8 757 aaPredicted RBP12.85□□□□□ -0.35
SMAD4-205ENST00000588745 MAGEF1Q9HAY2 307 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 PCDHA12Q9UN75 941 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 PCDHA5Q9Y5H7 936 aa12.85□□□□□ -0.35
SMAD4-205ENST00000588745 BIN1O00499 593 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 MSH4O15457 936 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 GTPBP6O43824 516 aaPredicted RBP12.84□□□□□ -0.35
SMAD4-205ENST00000588745 SMC2O95347 1197 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 PLCG1P19174 1290 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 OSBPP22059 807 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 AFMP43652 599 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 ZNF165P49910 485 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 HERVK_113P62684 666 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 BAATQ14032 418 aaPredicted RBP12.84□□□□□ -0.35
SMAD4-205ENST00000588745 DPCR1Q3MIW9 517 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 CEP55Q53EZ4 464 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 GPAT2Q6NUI2 795 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 PLA2G4DQ86XP0 818 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 TRIML1Q8N9V2 468 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 CHST13Q8NET6 341 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 IL31RAQ8NI17 732 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 CYP2W1Q8TAV3 490 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 SPATA20Q8TB22 786 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 CBX8Q9HC52 389 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 BTBD7Q9P203 1132 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 LCTP09848 1927 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
SMAD4-205ENST00000588745 MEIS1O00470 390 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 SLC26A4O43511 780 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 SARSP49591 514 aaKnown RBP12.83□□□□□ -0.36
SMAD4-205ENST00000588745 SPIRE1Q08AE8 756 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 DPYDQ12882 1025 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 GRB10Q13322 594 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 PGM5Q15124 567 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 TMEM119Q4V9L6 283 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 RIOX2Q8IUF8 465 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 LRRC15Q8TF66 581 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 CDK5RAP3Q96JB5 506 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 PNMA5Q96PV4 448 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 PLIN2Q99541 437 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 MXRA8Q9BRK3 442 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 NAT10Q9H0A0 1025 aaKnown RBP12.83□□□□□ -0.36
SMAD4-205ENST00000588745 A1CFQ9NQ94 594 aaKnown RBP12.83□□□□□ -0.36
SMAD4-205ENST00000588745 PXMP2Q9NR77 195 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 STK17AQ9UEE5 414 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 FBXO40Q9UH90 709 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 MAN1B1Q9UKM7 699 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 VAV3Q9UKW4 847 aa12.83□□□□□ -0.36
SMAD4-205ENST00000588745 CNMDO75829 334 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
SMAD4-205ENST00000588745 MYL1P05976 194 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 BCRP11274 1271 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 CETPP11597 493 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 EIF2AK2P19525 551 aaKnown RBP12.82□□□□□ -0.36
SMAD4-205ENST00000588745 GTF2A2P52657 109 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 HAUS3Q68CZ6 603 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 NIPA1Q7RTP0 329 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 ANP32BQ92688 251 aaKnown RBP12.82□□□□□ -0.36
SMAD4-205ENST00000588745 SLC5A5Q92911 643 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 UIMC1Q96RL1 719 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 RMDN3Q96TC7 470 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 MTRQ99707 1265 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 BPIFA3Q9BQP9 254 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 PDCD2LQ9BRP1 358 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 PAGR1Q9BTK6 254 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 SPATC1LQ9H0A9 340 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 KBTBD4Q9NVX7 518 aa12.82□□□□□ -0.36
SMAD4-205ENST00000588745 CYP39A1Q9NYL5 469 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms