RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 GOLGA8BA8MQT2 603 aa23.78■■□□□ 1.4
CIRBP-209ENST00000586555 EIF3JO75822 258 aaKnown RBP23.78■■□□□ 1.4
CIRBP-209ENST00000586555 NR3C2P08235 984 aa23.78■■□□□ 1.4
CIRBP-209ENST00000586555 TXNP10599 105 aaKnown RBP23.78■■□□□ 1.4
CIRBP-209ENST00000586555 CASTP20810 708 aaKnown RBP23.78■■□□□ 1.4
CIRBP-209ENST00000586555 RPS6KB1P23443 525 aa23.78■■□□□ 1.4
CIRBP-209ENST00000586555 HOXA13P31271 388 aaPredicted RBP23.78■■□□□ 1.4
CIRBP-209ENST00000586555 CPT1AP50416 773 aa23.78■■□□□ 1.4
CIRBP-209ENST00000586555 BEX3Q00994 111 aa23.78■■□□□ 1.4
CIRBP-209ENST00000586555 FPGSQ05932 587 aa23.78■■□□□ 1.4
CIRBP-209ENST00000586555 CMTR1Q8N1G2 835 aaKnown RBP23.78■■□□□ 1.4
CIRBP-209ENST00000586555 BAZ2BQ9UIF8 2168 aaKnown RBP23.77■■□□□ 1.4
CIRBP-209ENST00000586555 ZNF697Q5TEC3 545 aa23.77■■□□□ 1.4
CIRBP-209ENST00000586555 FAM126BQ8IXS8 530 aa23.77■■□□□ 1.4
CIRBP-209ENST00000586555 FBXL16Q8N461 479 aa23.77■■□□□ 1.4
CIRBP-209ENST00000586555 SLC43A3Q8NBI5 491 aa23.77■■□□□ 1.4
CIRBP-209ENST00000586555 SMARCC2Q8TAQ2 1214 aa23.77■■□□□ 1.4
CIRBP-209ENST00000586555 CD4P01730 458 aa23.76■■□□□ 1.39
CIRBP-209ENST00000586555 CPA1P15085 419 aa23.76■■□□□ 1.39
CIRBP-209ENST00000586555 SEPT14Q6ZU15 432 aa23.76■■□□□ 1.39
CIRBP-209ENST00000586555 FCHSD1Q86WN1 690 aa23.76■■□□□ 1.39
CIRBP-209ENST00000586555 OR6J1Q8NGC5 347 aa23.76■■□□□ 1.39
CIRBP-209ENST00000586555 BRF1Q92994 677 aa23.76■■□□□ 1.39
CIRBP-209ENST00000586555 PDCD2LQ9BRP1 358 aa23.76■■□□□ 1.39
CIRBP-209ENST00000586555 SEZ6LQ9BYH1 1024 aa23.76■■□□□ 1.39
CIRBP-209ENST00000586555 POLR3EQ9NVU0 708 aa23.76■■□□□ 1.39
CIRBP-209ENST00000586555 MYCLP12524 364 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-209ENST00000586555 PTGS1P23219 599 aa23.75■■□□□ 1.39
CIRBP-209ENST00000586555 METAP2P50579 478 aaKnown RBP eCLIP23.75■■□□□ 1.39
CIRBP-209ENST00000586555 TMEM63BQ5T3F8 832 aa23.75■■□□□ 1.39
CIRBP-209ENST00000586555 MFSD5Q6N075 450 aa23.75■■□□□ 1.39
CIRBP-209ENST00000586555 KCNV1Q6PIU1 500 aa23.75■■□□□ 1.39
CIRBP-209ENST00000586555 RUFY3Q7L099 469 aa23.75■■□□□ 1.39
CIRBP-209ENST00000586555 FAM161BQ96MY7 647 aa23.75■■□□□ 1.39
CIRBP-209ENST00000586555 SEMA6BQ9H3T3 888 aa23.75■■□□□ 1.39
CIRBP-209ENST00000586555 CYP46A1Q9Y6A2 500 aa23.75■■□□□ 1.39
CIRBP-209ENST00000586555 CDH23Q9H251 3354 aa23.75■■□□□ 1.39
CIRBP-209ENST00000586555 CCND2P30279 289 aa23.74■■□□□ 1.39
CIRBP-209ENST00000586555 APOBRQ0VD83 1088 aa23.74■■□□□ 1.39
CIRBP-209ENST00000586555 PGM5Q15124 567 aa23.74■■□□□ 1.39
CIRBP-209ENST00000586555 CXCL17Q6UXB2 119 aa23.74■■□□□ 1.39
CIRBP-209ENST00000586555 RNPC3Q96LT9 517 aaKnown RBP23.74■■□□□ 1.39
CIRBP-209ENST00000586555 TM6SF1Q9BZW5 370 aa23.74■■□□□ 1.39
CIRBP-209ENST00000586555 PSTPIP2Q9H939 334 aa23.74■■□□□ 1.39
CIRBP-209ENST00000586555 PIK3CDO00329 1044 aa23.73■■□□□ 1.39
CIRBP-209ENST00000586555 KPNA6O60684 536 aa23.73■■□□□ 1.39
CIRBP-209ENST00000586555 C16orf59Q7L2K0 433 aa23.73■■□□□ 1.39
CIRBP-209ENST00000586555 HEATR3Q7Z4Q2 680 aa23.73■■□□□ 1.39
CIRBP-209ENST00000586555 VSIG10LQ86VR7 867 aa23.73■■□□□ 1.39
CIRBP-209ENST00000586555 TTYH1Q9H313 450 aaPredicted RBP23.73■■□□□ 1.39
CIRBP-209ENST00000586555 ZSWIM6Q9HCJ5 1215 aa23.73■■□□□ 1.39
CIRBP-209ENST00000586555 GRIN2DO15399 1336 aa23.73■■□□□ 1.39
CIRBP-209ENST00000586555 MYO9BQ13459 2157 aa23.72■■□□□ 1.39
CIRBP-209ENST00000586555 hCG_1984214I3L0E3 225 aa23.72■■□□□ 1.39
CIRBP-209ENST00000586555 TLR3O15455 904 aaKnown RBP23.72■■□□□ 1.39
CIRBP-209ENST00000586555 STAM2O75886 525 aa23.72■■□□□ 1.39
CIRBP-209ENST00000586555 GH1P01241 217 aa23.72■■□□□ 1.39
CIRBP-209ENST00000586555 CCDC62Q6P9F0 684 aa23.72■■□□□ 1.39
CIRBP-209ENST00000586555 ZNF713Q8N859 430 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-209ENST00000586555 CDX2Q99626 313 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-209ENST00000586555 AGXT2Q9BYV1 514 aa23.72■■□□□ 1.39
CIRBP-209ENST00000586555 MRVI1Q9Y6F6 885 aa23.72■■□□□ 1.39
CIRBP-209ENST00000586555 V9GY48 417 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-209ENST00000586555 CNTNAP5Q8WYK1 1306 aa23.71■■□□□ 1.39
CIRBP-209ENST00000586555 hCG_1642624A0A1W2PR95 340 aa23.71■■□□□ 1.39
CIRBP-209ENST00000586555 TEX2Q8IWB9 1127 aa23.71■■□□□ 1.39
CIRBP-209ENST00000586555 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.71■■□□□ 1.392e-15■■■□□ 14.8
CIRBP-209ENST00000586555 UNC80Q8N2C7 3258 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 TMEM265A0A087WTH1 108 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 DLL1O00548 723 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 MYL3P08590 195 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 TGFB3P10600 412 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 PPIGQ13427 754 aaKnown RBP eCLIP23.7■■□□□ 1.384e-12■■■□□ 16.7
CIRBP-209ENST00000586555 ITGA7Q13683 1181 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 LY6KQ17RY6 165 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 GNPTABQ3T906 1256 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 TMEM240Q5SV17 173 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 RASIP1Q5U651 963 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 XRRA1Q6P2D8 792 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 USP17L6PQ6QN14 398 aa23.7■■□□□ 1.38
CIRBP-209ENST00000586555 DDX41Q9UJV9 622 aaKnown RBP23.7■■□□□ 1.38
CIRBP-209ENST00000586555 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.69■■□□□ 1.38
CIRBP-209ENST00000586555 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.69■■□□□ 1.38
CIRBP-209ENST00000586555 A6NJR5 290 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 MEIS2O14770 477 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 ARIH2O95376 493 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 CDC27P30260 824 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 NAPAP54920 295 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 PPP1R18Q6NYC8 613 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 TMEM199Q8N511 208 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 COPS5Q92905 334 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 MTG1Q9BT17 334 aaPredicted RBP23.69■■□□□ 1.38
CIRBP-209ENST00000586555 GLT8D2Q9H1C3 349 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 EHMT1Q9H9B1 1298 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 KIAA1217Q5T5P2 1943 aa23.69■■□□□ 1.38
CIRBP-209ENST00000586555 SPDYE3A6NKU9 549 aa23.68■■□□□ 1.38
CIRBP-209ENST00000586555 CSF2RAP15509 400 aa23.68■■□□□ 1.38
CIRBP-209ENST00000586555 ADD1P35611 737 aaKnown RBP23.68■■□□□ 1.38
CIRBP-209ENST00000586555 ANAPC15P60006 121 aa23.68■■□□□ 1.38
CIRBP-209ENST00000586555 PURAQ00577 322 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms