RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 ARHGAP1Q07960 439 aa16.34■□□□□ 0.21
HDAC5-203ENST00000586339 NCOA7Q8NI08 942 aa16.34■□□□□ 0.21
HDAC5-203ENST00000586339 AFG1LQ8WV93 481 aa16.34■□□□□ 0.21
HDAC5-203ENST00000586339 SCLYQ96I15 445 aa16.34■□□□□ 0.21
HDAC5-203ENST00000586339 GAS2L1Q99501 681 aaPredicted RBP16.34■□□□□ 0.21
HDAC5-203ENST00000586339 RIOX1Q9H6W3 641 aa16.34■□□□□ 0.21
HDAC5-203ENST00000586339 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
HDAC5-203ENST00000586339 SLC4A7Q9Y6M7 1214 aa16.34■□□□□ 0.21
HDAC5-203ENST00000586339 PPP1R11O60927 126 aaPredicted RBP16.33■□□□□ 0.2
HDAC5-203ENST00000586339 ACTN1P12814 892 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 CASTP20810 708 aaKnown RBP16.33■□□□□ 0.2
HDAC5-203ENST00000586339 BFSP2Q13515 415 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 WTAPQ15007 396 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 DGKDQ16760 1214 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 KCNV1Q6PIU1 500 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 STOX1Q6ZVD7 989 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 CCDC155Q8N6L0 562 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 CAGE1Q8TC20 777 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 VWCEQ96DN2 955 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 COL25A1Q9BXS0 654 aaPredicted RBP16.33■□□□□ 0.2
HDAC5-203ENST00000586339 DDX41Q9UJV9 622 aaKnown RBP16.33■□□□□ 0.2
HDAC5-203ENST00000586339 NOD1Q9Y239 953 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 KAT6AQ92794 2004 aa16.33■□□□□ 0.2
HDAC5-203ENST00000586339 E7EWF7 191 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 TROAPQ12815 778 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 PTPRSQ13332 1948 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 LAMC2Q13753 1193 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 RETREG2Q8NC44 543 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 PPTC7Q8NI37 304 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 MAP4K1Q92918 833 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 PDCD2LQ9BRP1 358 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 MTA3Q9BTC8 594 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 KATNAL1Q9BW62 490 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 SLC28A3Q9HAS3 691 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 PCDHA11Q9Y5I1 949 aa16.32■□□□□ 0.2
HDAC5-203ENST00000586339 ZBBXA8MT70 800 aa16.31■□□□□ 0.2
HDAC5-203ENST00000586339 IQCF3P0C7M6 154 aa16.31■□□□□ 0.2
HDAC5-203ENST00000586339 RBL2Q08999 1139 aa16.31■□□□□ 0.2
HDAC5-203ENST00000586339 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
HDAC5-203ENST00000586339 HOMER1Q86YM7 354 aa16.31■□□□□ 0.2
HDAC5-203ENST00000586339 MAP3K14Q99558 947 aa16.31■□□□□ 0.2
HDAC5-203ENST00000586339 SPTBN5Q9NRC6 3674 aaKnown RBP16.31■□□□□ 0.2
HDAC5-203ENST00000586339 DOCK5Q9H7D0 1870 aa16.31■□□□□ 0.2
HDAC5-203ENST00000586339 PRRC2BQ5JSZ5 2229 aaKnown RBP16.3■□□□□ 0.2
HDAC5-203ENST00000586339 PNMA6FA0A0J9YX94 578 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 GCOM1H8Y6P7 765 aaPredicted RBP16.3■□□□□ 0.2
HDAC5-203ENST00000586339 PARNO95453 639 aaKnown RBP16.3■□□□□ 0.2
HDAC5-203ENST00000586339 F2P00734 622 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 POLR2MP0CAP2 368 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 TGFB3P10600 412 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 HOXD8P13378 290 aaPredicted RBP16.3■□□□□ 0.2
HDAC5-203ENST00000586339 ATP2A2P16615 1042 aaKnown RBP16.3■□□□□ 0.2
HDAC5-203ENST00000586339 PGM5Q15124 567 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 PTGISQ16647 500 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 SLC35G1Q2M3R5 365 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 TMEM67Q5HYA8 995 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 CHST3Q7LGC8 479 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 DEFB128Q7Z7B8 93 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 VSIG10LQ86VR7 867 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 MB21D2Q8IYB1 491 aaPredicted RBP16.3■□□□□ 0.2
HDAC5-203ENST00000586339 AFAP1L1Q8TED9 768 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 KAT2BQ92831 832 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 PIGSQ96S52 555 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 SLC9A7Q96T83 725 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 NKX2-4Q9H2Z4 354 aa16.3■□□□□ 0.2
HDAC5-203ENST00000586339 YBX2Q9Y2T7 364 aaKnown RBP16.3■□□□□ 0.2
HDAC5-203ENST00000586339 FRMPD4Q14CM0 1322 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 CYTH3O43739 400 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 RGS20O76081 388 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 BAIAP3O94812 1187 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 CCND2P30279 289 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
HDAC5-203ENST00000586339 PHOSPHO2Q8TCD6 241 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 IGDCC4Q8TDY8 1250 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 PRDM12Q9H4Q4 367 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 GTF2IRD1Q9UHL9 959 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 RBM8AQ9Y5S9 174 aaKnown RBP16.29■□□□□ 0.2
HDAC5-203ENST00000586339 TAF6LQ9Y6J9 622 aa16.29■□□□□ 0.2
HDAC5-203ENST00000586339 MICAL3Q7RTP6 2002 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 HAS3O00219 553 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 DDAH1O94760 285 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 MYCLP12524 364 aaPredicted RBP16.28■□□□□ 0.2
HDAC5-203ENST00000586339 HOXA13P31271 388 aaPredicted RBP16.28■□□□□ 0.2
HDAC5-203ENST00000586339 KIF5BP33176 963 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 PSEN2P49810 448 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 ANTXR2P58335 489 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 CELF3Q5SZQ8 465 aaKnown RBP16.28■□□□□ 0.2
HDAC5-203ENST00000586339 PPP2R2DQ66LE6 453 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 GDF6Q6KF10 455 aaPredicted RBP16.28■□□□□ 0.2
HDAC5-203ENST00000586339 SYMPKQ92797 1274 aaKnown RBP16.28■□□□□ 0.2
HDAC5-203ENST00000586339 CTAGE1Q96RT6 745 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 SPZ1Q9BXG8 430 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 SENP2Q9HC62 589 aa16.28■□□□□ 0.2
HDAC5-203ENST00000586339 PPFIA4O75335 1185 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 STAM2O75886 525 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 SMARCA1P28370 1054 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 RABGGTBP53611 331 aa16.27■□□□□ 0.2
HDAC5-203ENST00000586339 CHMP4BP1P59074 171 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms