RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 PLA2G6O60733 806 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 CXCL10P02778 98 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 NUCB1Q02818 461 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 PTPROQ16827 1216 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 EPC2Q52LR7 807 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 RNF207Q6ZRF8 634 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 CHD1LQ86WJ1 897 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 ADHFE1Q8IWW8 467 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 IFNL3Q8IZI9 196 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 MYOCDQ8IZQ8 938 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 PRSS33Q8NF86 280 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 ALG1Q9BT22 464 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 CTNNA3Q9UI47 895 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 TTC41PQ6P2S7 1318 aa12.02□□□□□ -0.49
GGA3-219ENST00000584550 ZNF318Q5VUA4 2279 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 PATL2C9JE40 543 aaKnown RBP12.01□□□□□ -0.49
GGA3-219ENST00000584550 RNF113AO15541 343 aaKnown RBP12.01□□□□□ -0.49
GGA3-219ENST00000584550 CENPBP07199 599 aaPredicted RBP12.01□□□□□ -0.49
GGA3-219ENST00000584550 GPM6BQ13491 265 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 LY6KQ17RY6 165 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 ZNF618Q5T7W0 954 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 C7orf31Q8N865 590 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 PI4K2BQ8TCG2 481 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 CLEC4DQ8WXI8 215 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 APPBP2Q92624 585 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 KAT2BQ92831 832 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 WNT8BQ93098 351 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 PABPC5Q96DU9 382 aaKnown RBP12.01□□□□□ -0.49
GGA3-219ENST00000584550 UPF3BQ9BZI7 483 aaKnown RBP12.01□□□□□ -0.49
GGA3-219ENST00000584550 RANBP17Q9H2T7 1088 aaKnown RBP12.01□□□□□ -0.49
GGA3-219ENST00000584550 GPCPD1Q9NPB8 672 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 PRKAG3Q9UGI9 489 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 FAM50BQ9Y247 325 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 FRMPD2Q68DX3 1309 aaPredicted RBP12.01□□□□□ -0.49
GGA3-219ENST00000584550 PLIN4Q96Q06 1357 aa12.01□□□□□ -0.49
GGA3-219ENST00000584550 TSPY2A6NKD2 308 aa12□□□□□ -0.49
GGA3-219ENST00000584550 ST18O60284 1047 aa12□□□□□ -0.49
GGA3-219ENST00000584550 UPP2O95045 317 aa12□□□□□ -0.49
GGA3-219ENST00000584550 CSPG5O95196 566 aa12□□□□□ -0.49
GGA3-219ENST00000584550 AMHP03971 560 aa12□□□□□ -0.49
GGA3-219ENST00000584550 SLC3A2P08195 630 aaKnown RBP12□□□□□ -0.49
GGA3-219ENST00000584550 MMP3P08254 477 aa12□□□□□ -0.49
GGA3-219ENST00000584550 GNAT2P19087 354 aa12□□□□□ -0.49
GGA3-219ENST00000584550 PDE1AP54750 535 aa12□□□□□ -0.49
GGA3-219ENST00000584550 RPS6P62753 249 aaKnown RBP12□□□□□ -0.49
GGA3-219ENST00000584550 ZNF200P98182 395 aaPredicted RBP12□□□□□ -0.49
GGA3-219ENST00000584550 PPARAQ07869 468 aa12□□□□□ -0.49
GGA3-219ENST00000584550 MBTPS1Q14703 1052 aa12□□□□□ -0.49
GGA3-219ENST00000584550 TIGD5Q53EQ6 642 aa12□□□□□ -0.49
GGA3-219ENST00000584550 SEPT14Q6ZU15 432 aa12□□□□□ -0.49
GGA3-219ENST00000584550 RNF135Q8IUD6 432 aa12□□□□□ -0.49
GGA3-219ENST00000584550 SEC62Q99442 399 aaKnown RBP12□□□□□ -0.49
GGA3-219ENST00000584550 MPHOSPH6Q99547 160 aaKnown RBP12□□□□□ -0.49
GGA3-219ENST00000584550 GTF2IRD1Q9UHL9 959 aa12□□□□□ -0.49
GGA3-219ENST00000584550 LOC102724159A0A0B4J2E5 919 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 H3BNC9 293 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 EFCAB14O75071 495 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 LGR5O75473 907 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 PARNO95453 639 aaKnown RBP11.99□□□□□ -0.49
GGA3-219ENST00000584550 NEFLP07196 543 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 CASTP20810 708 aaKnown RBP11.99□□□□□ -0.49
GGA3-219ENST00000584550 LTBRP36941 435 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 CTDSPL2Q05D32 466 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 DLX2Q07687 328 aaPredicted RBP11.99□□□□□ -0.49
GGA3-219ENST00000584550 PWP2Q15269 919 aaKnown RBP11.99□□□□□ -0.49
GGA3-219ENST00000584550 SYDE2Q5VT97 1194 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 TRAF7Q6Q0C0 670 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 SESTD1Q86VW0 696 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 KBTBD3Q8NAB2 608 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 DBF4BQ8NFT6 615 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 FSD1Q9BTV5 496 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 NACAP1Q9BZK3 213 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 NAPBQ9H115 298 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 NSUN3Q9H649 340 aaKnown RBP11.99□□□□□ -0.49
GGA3-219ENST00000584550 FAM86C1Q9NVL1 165 aa11.99□□□□□ -0.49
GGA3-219ENST00000584550 SALL3Q9BXA9 1300 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 RANBP6O60518 1105 aaKnown RBP11.98□□□□□ -0.49
GGA3-219ENST00000584550 GH1P01241 217 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 ZNF286BP0CG31 522 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 EDNRBP24530 442 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 PSEN2P49810 448 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 HTRA4P83105 476 aaPredicted RBP11.98□□□□□ -0.49
GGA3-219ENST00000584550 ARHGAP1Q07960 439 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 CCDC62Q6P9F0 684 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 RPAINQ86UA6 219 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 TMEM192Q8IY95 271 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 PBXIP1Q96AQ6 731 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 YME1L1Q96TA2 773 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 IGFLR1Q9H665 355 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 MYO15AQ9UKN7 3530 aa11.98□□□□□ -0.49
GGA3-219ENST00000584550 TRIM6-TRIM34B2RNG4 842 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 SORBS3O60504 671 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 GTF2F1P35269 517 aaKnown RBP eCLIP11.97□□□□□ -0.49
GGA3-219ENST00000584550 THPOP40225 353 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 PTPN5P54829 565 aa11.97□□□□□ -0.49
GGA3-219ENST00000584550 RBL2Q08999 1139 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms