RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 HOOK2Q96ED9 719 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 ANKRD27Q96NW4 1050 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 PYM1Q9BRP8 204 aaKnown RBP8.32□□□□□ -1.08
TVP23C-208ENST00000581273 TSGA10Q9BZW7 698 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 ANKRD2Q9GZV1 360 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 EPC1Q9H2F5 836 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 VCPKMTQ9H867 229 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 HELLSQ9NRZ9 838 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 FANCLQ9NW38 375 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 HPSEQ9Y251 543 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 GOLGA6L10A0A0M3HER8 536 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 LRRIQ3A6PVS8 624 aaPredicted RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 BIN1O00499 593 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 CPLX1O14810 134 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 N4BP1O75113 896 aaKnown RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 PHACTR2O75167 634 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 NEBLO76041 1014 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ATP1A3P13637 1013 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ZNF18P17022 549 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ATP5JP18859 108 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ITGA6P23229 1130 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 TNFRSF8P28908 595 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 GJA5P36382 358 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 GJA8P48165 433 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 IREB2P48200 963 aaKnown RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 PLCD1P51178 756 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 FOSBP53539 338 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 CLNS1AP54105 237 aaKnown RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 EPHB4P54760 987 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ACTN3Q08043 901 aaPredicted RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 TRIM29Q14134 588 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 NR1I3Q14994 352 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 IMMTQ16891 758 aaKnown RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 SUPT20HL1Q3ZLR7 823 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 GLE1Q53GS7 698 aaKnown RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ARSIQ5FYB1 569 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 BEND3Q5T5X7 828 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 NBPF12Q5TAG4 269 aaPredicted RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 KCNV1Q6PIU1 500 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 C7orf61Q8IZ16 206 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 SLC35F6Q8N357 371 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 CERS5Q8N5B7 392 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 CCDC155Q8N6L0 562 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 USP38Q8NB14 1042 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 CAGE1Q8TC20 777 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 WASF1Q92558 559 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 KAT2BQ92831 832 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ZKSCAN4Q969J2 545 aaPredicted RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ZBED3Q96IU2 234 aaPredicted RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 SH3GL2Q99962 352 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 LRFN3Q9BTN0 628 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 UBE2OQ9C0C9 1292 aaKnown RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ZSWIM4Q9H7M6 989 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 KAT14Q9H8E8 782 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 ELP3Q9H9T3 547 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 CD209Q9NNX6 404 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 C9orf78Q9NZ63 289 aaPredicted RBP8.31□□□□□ -1.08
TVP23C-208ENST00000581273 CEP131Q9UPN4 1083 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 SAR1BQ9Y6B6 198 aa8.31□□□□□ -1.08
TVP23C-208ENST00000581273 OTOFQ9HC10 1997 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 A0A0D9SFI3 127 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 NEURL1BA8MQ27 555 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 KRT86O43790 486 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 MFAP3LO75121 409 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 USP2O75604 605 aaPredicted RBP8.3□□□□□ -1.08
TVP23C-208ENST00000581273 ZBTB48P10074 688 aaPredicted RBP8.3□□□□□ -1.08
TVP23C-208ENST00000581273 GBP2P32456 591 aaPredicted RBP8.3□□□□□ -1.08
TVP23C-208ENST00000581273 FNTAP49354 379 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 RWDD2BP57060 319 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 EXOSC10Q01780 885 aaKnown RBP8.3□□□□□ -1.08
TVP23C-208ENST00000581273 CHRNDQ07001 517 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 TRAF1Q13077 416 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 ZNF697Q5TEC3 545 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 NT5DC1Q5TFE4 455 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 SPATA1Q5VX52 437 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 RESP18Q5W5W9 173 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 CCNI2Q6ZMN8 369 aaPredicted RBP8.3□□□□□ -1.08
TVP23C-208ENST00000581273 KDM7AQ6ZMT4 941 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 TRAPPC11Q7Z392 1133 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 NKX2-3Q8TAU0 364 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 ADAMTS19Q8TE59 1207 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 PRMT6Q96LA8 375 aaPredicted RBP8.3□□□□□ -1.08
TVP23C-208ENST00000581273 FAM227BQ96M60 508 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 CCDC114Q96M63 670 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 PTPN18Q99952 460 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 PAIP2Q9BPZ3 127 aaKnown RBP8.3□□□□□ -1.08
TVP23C-208ENST00000581273 SELENOOQ9BVL4 669 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 C1QTNF1Q9BXJ1 281 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 SIL1Q9H173 461 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 EPN3Q9H201 632 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 LZTFL1Q9NQ48 299 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 CPSF2Q9P2I0 782 aaKnown RBP8.3□□□□□ -1.08
TVP23C-208ENST00000581273 NFE2L3Q9Y4A8 694 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 SSC5DA1L4H1 1573 aa8.3□□□□□ -1.08
TVP23C-208ENST00000581273 GOLGA6L10A6NI86 522 aa8.29□□□□□ -1.08
TVP23C-208ENST00000581273 HMGB1P1B2RPK0 211 aaPredicted RBP8.29□□□□□ -1.08
TVP23C-208ENST00000581273 H7C1W4 665 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms