RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 NPLOC4Q8TAT6 608 aa10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 ZNF296Q8WUU4 475 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 SOCS4Q8WXH5 440 aa10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 MXRA8Q9BRK3 442 aa10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 ARHGAP39Q9C0H5 1083 aa10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 POLR3EQ9NVU0 708 aa10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 RCOR1Q9UKL0 485 aa10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 CEP131Q9UPN4 1083 aa10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 UBIAD1Q9Y5Z9 338 aa10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 CLIC4Q9Y696 253 aa10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 MORC2Q9Y6X9 1032 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 RBBP6Q7Z6E9 1792 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-220ENST00000581160 PLXNB2O15031 1838 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 FAM86B1E9PN63 330 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 MAFGO15525 162 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 ECM2O94769 699 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 TDP2O95551 362 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 YEATS4O95619 227 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 BMP15O95972 392 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 FAM86B2P0C5J1 330 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 CYP2B6P20813 491 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 PDE4DQ08499 809 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 NBR1Q14596 966 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 SLC39A14Q15043 492 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 PTPAQ15257 358 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 CEP55Q53EZ4 464 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 NLRX1Q86UT6 975 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 LINC00301Q8NCQ3 95 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 CD99L2Q8TCZ2 262 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 MAML3Q96JK9 1138 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 CHAMP1Q96JM3 812 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 SCAND2PQ9GZW5 306 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 JADE2Q9NQC1 790 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 DDX25Q9UHL0 483 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 MYH7BA7E2Y1 1941 aa10.4□□□□□ -0.74
CDK5RAP3-220ENST00000581160 MGAMO43451 1857 aa10.4□□□□□ -0.75
CDK5RAP3-220ENST00000581160 DOCK3Q8IZD9 2030 aa10.4□□□□□ -0.75
CDK5RAP3-220ENST00000581160 LCTP09848 1927 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 IGLV3-22A0A075B6J6 115 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 LAD1O00515 517 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TBX3O15119 743 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PPP6R2O75170 966 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 IGHA2P01877 340 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ITGB5P18084 799 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MCM7P33993 719 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PRMT2P55345 433 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CAP1Q01518 475 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CEBPZQ03701 1054 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PTGDRQ13258 359 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 IRF5Q13568 498 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 STK38Q15208 465 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PRR16Q569H4 304 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 OLFML2BQ68BL8 750 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PLA2G4DQ86XP0 818 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CYP2W1Q8TAV3 490 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ZFP91Q96JP5 570 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 GBP4Q96PP9 640 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MTMR9Q96QG7 549 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TINF2Q9BSI4 451 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FTOQ9C0B1 505 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SRRDQ9UH36 339 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 GABRQQ9UN88 632 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CNPY2Q9Y2B0 182 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ZNF236Q9UL36 1845 aa10.39□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SYNGAP1Q96PV0 1343 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SPATA31C2B4DYI2 1134 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SPTLC2O15270 562 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SLC37A4O43826 429 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 NEMFO60524 1076 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 RGS20O76081 388 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SNAI1O95863 264 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ARP10275 920 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 NCLP19338 710 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ICAM3P32942 547 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 PRPHP41219 470 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FLT3LGP49771 235 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ATP2C1P98194 919 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SETQ01105 290 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 GNPTABQ3T906 1256 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ARL6IP4Q66PJ3 421 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 ARMCX2Q7L311 632 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TRMT44Q8IYL2 757 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 KCNG4Q8TDN1 519 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 LEO1Q8WVC0 666 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 LENG9Q96B70 501 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 GPRASP2Q96D09 838 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 SPATA32Q96LK8 384 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 FAM20AQ96MK3 541 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 INPP4AQ96PE3 977 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 APBA2Q99767 749 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 WDR11Q9BZH6 1224 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TMEM60Q9H2L4 133 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MYH15Q9Y2K3 1946 aa10.38□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TCHHQ07283 1943 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 RBM47A0AV96 593 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MSH4O15457 936 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 MARCH6O60337 910 aa10.37□□□□□ -0.75
CDK5RAP3-220ENST00000581160 TGFB3P10600 412 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms