RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 TINF2Q9BSI4 451 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 FLRT1Q9NZU1 646 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 NOL7Q9UMY1 257 aaKnown RBP18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 TRIM17Q9Y577 477 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 TCHHQ07283 1943 aa18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 SYNGAP1Q96PV0 1343 aa18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 WNT7AO00755 349 aa18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 IGHA2P01877 340 aa18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 CIITAP33076 1130 aa18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 PDE4DQ08499 809 aa18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 STXBP2Q15833 593 aa18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 LETM2Q2VYF4 491 aa18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 ARMCX2Q7L311 632 aa18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 ZFP91Q96JP5 570 aaPredicted RBP18.1■□□□□ 0.49
CSNK1D-212ENST00000580061 CYP3A7-CYP3A51PA0A087WV96 503 aa18.09■□□□□ 0.49
CSNK1D-212ENST00000580061 STAM2O75886 525 aa18.09■□□□□ 0.49
CSNK1D-212ENST00000580061 CYP3A7P24462 503 aa18.09■□□□□ 0.49
CSNK1D-212ENST00000580061 PPP4R3AQ6IN85 833 aa18.09■□□□□ 0.49
CSNK1D-212ENST00000580061 MOXD1Q6UVY6 613 aa18.09■□□□□ 0.49
CSNK1D-212ENST00000580061 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.09■□□□□ 0.49
CSNK1D-212ENST00000580061 UBIAD1Q9Y5Z9 338 aa18.09■□□□□ 0.49
CSNK1D-212ENST00000580061 FAM86B1E9PN63 330 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 CCNT1O60563 726 aaKnown RBP18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 EIF3JO75822 258 aaKnown RBP18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 TDP2O95551 362 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 SNAI1O95863 264 aaPredicted RBP18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 FAM86B2P0C5J1 330 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 ATP2B1P20020 1258 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 ZNF76P36508 570 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 NBR1Q14596 966 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 CEP55Q53EZ4 464 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 TTC38Q5R3I4 469 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 TRMT44Q8IYL2 757 aaKnown RBP18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 RAET1EQ8TD07 263 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 TRIB2Q92519 343 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 MBOAT7Q96N66 472 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 NAP1L4Q99733 375 aaKnown RBP18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 MXRA8Q9BRK3 442 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 RTEL1Q9NZ71 1219 aa18.08■□□□□ 0.48
CSNK1D-212ENST00000580061 IGLV3-22A0A075B6J6 115 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 RGS20O76081 388 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 GCFC2P16383 781 aaKnown RBP18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 ITGB5P18084 799 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 NIPA1Q7RTP0 329 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 CYP2W1Q8TAV3 490 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 PXYLP1Q8TE99 480 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 INPP4AQ96PE3 977 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 KATNBL1Q9H079 304 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 JADE2Q9NQC1 790 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 PCDHB6Q9Y5E3 794 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 HTTP42858 3142 aa18.07■□□□□ 0.48
CSNK1D-212ENST00000580061 MEIS1O00470 390 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 ADCY3O60266 1144 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 CYP2C19P33261 490 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 ORC2Q13416 577 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 ZNF174Q15697 407 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 FOXD4L6Q3SYB3 417 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 Q4G0T1 1027 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 FOXD4L3Q6VB84 417 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 EEPD1Q7L9B9 569 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 LENG9Q96B70 501 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 WDR11Q9BZH6 1224 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 ABHD16BQ9H3Z7 469 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 VTA1Q9NP79 307 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 DDX25Q9UHL0 483 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 PTPN22Q9Y2R2 807 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 ATP6V1DQ9Y5K8 247 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 PTCH2Q9Y6C5 1203 aa18.06■□□□□ 0.48
CSNK1D-212ENST00000580061 SLC37A4O43826 429 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 ELNP15502 786 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 MCM7P33993 719 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 SETQ01105 290 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 GNPTABQ3T906 1256 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 PRR16Q569H4 304 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 MFSD14CQ5VZR4 134 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 CTU1Q7Z7A3 348 aaKnown RBP18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 NLRX1Q86UT6 975 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 FBXO16Q8IX29 292 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 SLAIN1Q8ND83 568 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 GPRASP2Q96D09 838 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 ZNF396Q96N95 335 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 USP28Q96RU2 1077 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 DOCK5Q9H7D0 1870 aa18.05■□□□□ 0.48
CSNK1D-212ENST00000580061 CENPFP49454 3210 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 MAFGO15525 162 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 ICAM3P32942 547 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 DNM1Q05193 864 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 MTMR1Q13613 665 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 ACVR2BQ13705 512 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 ATL3Q6DD88 541 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 TAPT1Q6NXT6 567 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 SEPT14Q6ZU15 432 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 PLA2G4DQ86XP0 818 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 POTEDQ86YR6 584 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 FTOQ9C0B1 505 aaKnown RBP eCLIP18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 CLIC4Q9Y696 253 aa18.04■□□□□ 0.48
CSNK1D-212ENST00000580061 RBM47A0AV96 593 aaKnown RBP18.03■□□□□ 0.48
CSNK1D-212ENST00000580061 SPATA31C2B4DYI2 1134 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms