RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 CUL9Q8IWT3 2517 aa26.45■■□□□ 1.83
CDKN2A-212ENST00000578845 RGS20O76081 388 aa26.45■■□□□ 1.82
CDKN2A-212ENST00000578845 VSIG10LQ86VR7 867 aa26.45■■□□□ 1.82
CDKN2A-212ENST00000578845 SESTD1Q86VW0 696 aa26.45■■□□□ 1.82
CDKN2A-212ENST00000578845 RPUSD2Q8IZ73 545 aaKnown RBP26.45■■□□□ 1.82
CDKN2A-212ENST00000578845 TIFAQ96CG3 184 aa26.45■■□□□ 1.82
CDKN2A-212ENST00000578845 PBX4Q9BYU1 374 aa26.45■■□□□ 1.82
CDKN2A-212ENST00000578845 CXXC1Q9P0U4 656 aaPredicted RBP26.45■■□□□ 1.82
CDKN2A-212ENST00000578845 VCANP13611 3396 aa26.45■■□□□ 1.82
CDKN2A-212ENST00000578845 GCOM1H8Y6P7 765 aaPredicted RBP26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 PITPNM1O00562 1244 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 PFKMP08237 780 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 POLR2MP0CAP2 368 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 SMARCA1P28370 1054 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 HOXA13P31271 388 aaPredicted RBP26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 PGM5Q15124 567 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 BMP2KLQ5H9B9 411 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 FAM47CQ5HY64 1035 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 ZNF654Q8IZM8 581 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 MYLIPQ8WY64 445 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 KAT2BQ92831 832 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 SCLYQ96I15 445 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 SPZ1Q9BXG8 430 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 MRVI1Q9Y6F6 885 aa26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 BAZ2BQ9UIF8 2168 aaKnown RBP26.44■■□□□ 1.82
CDKN2A-212ENST00000578845 HOXD8P13378 290 aaPredicted RBP26.43■■□□□ 1.82
CDKN2A-212ENST00000578845 CASTP20810 708 aaKnown RBP26.43■■□□□ 1.82
CDKN2A-212ENST00000578845 MCM5P33992 734 aa26.43■■□□□ 1.82
CDKN2A-212ENST00000578845 LAMC2Q13753 1193 aa26.43■■□□□ 1.82
CDKN2A-212ENST00000578845 KCNV1Q6PIU1 500 aa26.43■■□□□ 1.82
CDKN2A-212ENST00000578845 CASC1Q6TDU7 716 aa26.43■■□□□ 1.82
CDKN2A-212ENST00000578845 CENPQQ7L2Z9 268 aaPredicted RBP26.43■■□□□ 1.82
CDKN2A-212ENST00000578845 PPTC7Q8NI37 304 aa26.43■■□□□ 1.82
CDKN2A-212ENST00000578845 ZNF576Q9H609 170 aa26.43■■□□□ 1.82
CDKN2A-212ENST00000578845 FRMPD4Q14CM0 1322 aa26.42■■□□□ 1.82
CDKN2A-212ENST00000578845 GRXCR1A8MXD5 290 aa26.42■■□□□ 1.82
CDKN2A-212ENST00000578845 SLC27A2O14975 620 aa26.42■■□□□ 1.82
CDKN2A-212ENST00000578845 PRC1O43663 620 aa26.42■■□□□ 1.82
CDKN2A-212ENST00000578845 NECTIN1Q15223 517 aa26.42■■□□□ 1.82
CDKN2A-212ENST00000578845 DGKDQ16760 1214 aa26.42■■□□□ 1.82
CDKN2A-212ENST00000578845 TMTC2Q8N394 836 aa26.42■■□□□ 1.82
CDKN2A-212ENST00000578845 IL31RAQ8NI17 732 aa26.42■■□□□ 1.82
CDKN2A-212ENST00000578845 TMEM87BQ96K49 555 aa26.42■■□□□ 1.82
CDKN2A-212ENST00000578845 CHD7Q9P2D1 2997 aa26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 SH2B2O14492 632 aaPredicted RBP26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 KIF5BP33176 963 aa26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 RFC2P35250 354 aa26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 PBX2P40425 430 aa26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 GRIN2CQ14957 1233 aa26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 OTOP2Q7RTS6 562 aa26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 CTCFLQ8NI51 663 aaPredicted RBP26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 CTAGE1Q96RT6 745 aa26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 LZTS2Q9BRK4 669 aa26.41■■□□□ 1.82
CDKN2A-212ENST00000578845 TGFB3P10600 412 aa26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 MYCLP12524 364 aaPredicted RBP26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 FOSL2P15408 326 aa26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 LIFRP42702 1097 aa26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 COL9A3Q14050 684 aaPredicted RBP26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 RAB30Q15771 203 aa26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 CREB3L3Q68CJ9 461 aa26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 MAFAQ8NHW3 353 aaPredicted RBP26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 PPP1R13LQ8WUF5 828 aa26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 TANC1Q9C0D5 1861 aa26.4■■□□□ 1.82
CDKN2A-212ENST00000578845 F2P00734 622 aa26.39■■□□□ 1.82
CDKN2A-212ENST00000578845 CCND2P30279 289 aa26.39■■□□□ 1.82
CDKN2A-212ENST00000578845 BFSP2Q13515 415 aa26.39■■□□□ 1.82
CDKN2A-212ENST00000578845 MYSM1Q5VVJ2 828 aa26.39■■□□□ 1.82
CDKN2A-212ENST00000578845 DHX37Q8IY37 1157 aaKnown RBP26.39■■□□□ 1.82
CDKN2A-212ENST00000578845 MYL10Q9BUA6 226 aa26.39■■□□□ 1.82
CDKN2A-212ENST00000578845 KATNAL1Q9BW62 490 aa26.39■■□□□ 1.82
CDKN2A-212ENST00000578845 HAS3O00219 553 aa26.38■■□□□ 1.81
CDKN2A-212ENST00000578845 GNAQP50148 359 aa26.38■■□□□ 1.81
CDKN2A-212ENST00000578845 PTGISQ16647 500 aa26.38■■□□□ 1.81
CDKN2A-212ENST00000578845 CELF3Q5SZQ8 465 aaKnown RBP26.38■■□□□ 1.81
CDKN2A-212ENST00000578845 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.38■■□□□ 1.81
CDKN2A-212ENST00000578845 RRP36Q96EU6 259 aaKnown RBP26.38■■□□□ 1.81
CDKN2A-212ENST00000578845 ANO2Q9NQ90 1003 aa26.38■■□□□ 1.81
CDKN2A-212ENST00000578845 GTF2IRD1Q9UHL9 959 aa26.38■■□□□ 1.81
CDKN2A-212ENST00000578845 NOD1Q9Y239 953 aa26.38■■□□□ 1.81
CDKN2A-212ENST00000578845 DLL1O00548 723 aa26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 STAM2O75886 525 aa26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 IQCF3P0C7M6 154 aa26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 RBL2Q08999 1139 aa26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 GDF6Q6KF10 455 aaPredicted RBP26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 FCHSD1Q86WN1 690 aa26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 CAGE1Q8TC20 777 aa26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 MSRAQ9UJ68 235 aa26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 SLC4A7Q9Y6M7 1214 aa26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 SPTBN5Q9NRC6 3674 aaKnown RBP26.37■■□□□ 1.81
CDKN2A-212ENST00000578845 CCDC69A6NI79 296 aa26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 PIK3CDO00329 1044 aa26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 PPFIA4O75335 1185 aa26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 CALM1P0DP23 149 aa26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 CALM2P0DP24 149 aa26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 CALM3P0DP25 149 aa26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 UBA1P22314 1058 aaKnown RBP26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 PSEN2P49810 448 aa26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 SP2Q02086 613 aa26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 CCDC155Q8N6L0 562 aa26.36■■□□□ 1.81
CDKN2A-212ENST00000578845 RETREG2Q8NC44 543 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms