RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SOD2P04179 222 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 C6orf222P0C671 652 aaPredicted RBP3.6□□□□□ -1.83
COPS3-213ENST00000577210 GRK2P25098 689 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 GRK3P35626 688 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 GYS2P54840 703 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 SF1Q15637 639 aaKnown RBP3.6□□□□□ -1.83
COPS3-213ENST00000577210 CRY1Q16526 586 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 ARHGAP44Q17R89 818 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 PRSS53Q2L4Q9 553 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 BICRALQ6AI39 1079 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 CEP68Q76N32 757 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 NLRX1Q86UT6 975 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 ZSWIM9Q86XI8 627 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 NLGN4XQ8N0W4 816 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 TMEM52Q8NDY8 209 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 PHOSPHO1Q8TCT1 267 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 SEC14L1Q92503 715 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 FBXW5Q969U6 566 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 SCYL1Q96KG9 808 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 JMJD8Q96S16 334 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 LGR4Q9BXB1 951 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 SPC25Q9HBM1 224 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 CABP5Q9NP86 173 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 PRDM7Q9NQW5 492 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 DBR1Q9UK59 544 aaKnown RBP3.6□□□□□ -1.83
COPS3-213ENST00000577210 MAPRE3Q9UPY8 281 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 YBX2Q9Y2T7 364 aaKnown RBP3.6□□□□□ -1.83
COPS3-213ENST00000577210 X6R8D5 127 aa3.6□□□□□ -1.83
COPS3-213ENST00000577210 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.59□□□□□ -1.83
COPS3-213ENST00000577210 OR14I1A6ND48 311 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 RBAK-RBAKDNI3L0D1 243 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 ARVCFO00192 962 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 DNAJC6O75061 913 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 RAPGEF3O95398 923 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 GNAT1P11488 350 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 BCL6P41182 706 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 ERVFRD-1P60508 538 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 OCRLQ01968 901 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 SART3Q15020 963 aaKnown RBP3.59□□□□□ -1.83
COPS3-213ENST00000577210 ZNF124Q15973 351 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 NTRK3Q16288 839 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 CT47A1Q5JQC4 288 aaPredicted RBP3.59□□□□□ -1.83
COPS3-213ENST00000577210 ZPBP2Q6X784 338 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 C16orf59Q7L2K0 433 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 FAM177A1Q8N128 213 aaPredicted RBP3.59□□□□□ -1.83
COPS3-213ENST00000577210 FAM168AQ92567 244 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 INTS4Q96HW7 963 aaKnown RBP3.59□□□□□ -1.83
COPS3-213ENST00000577210 CELF4Q9BZC1 486 aaKnown RBP3.59□□□□□ -1.83
COPS3-213ENST00000577210 BRINP2Q9C0B6 783 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 CAAP1Q9H8G2 361 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 SLC52A2Q9HAB3 445 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 C19orf73Q9NVV2 129 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 MARCH2Q9P0N8 246 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 GULP1Q9UBP9 304 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 CD2APQ9Y5K6 639 aa3.59□□□□□ -1.83
COPS3-213ENST00000577210 TCRBV16S1A1N1A0A5B0 115 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 ANKRD62A6NC57 917 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 HGSO14964 777 aaPredicted RBP3.58□□□□□ -1.84
COPS3-213ENST00000577210 CRTAMO95727 393 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 FUCA1P04066 466 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 POU3F2P20265 443 aaPredicted RBP3.58□□□□□ -1.84
COPS3-213ENST00000577210 GJA4P35212 333 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 PDE6BP35913 854 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 MVKQ03426 396 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 CYP4F3Q08477 520 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 CBX2Q14781 532 aaPredicted RBP3.58□□□□□ -1.84
COPS3-213ENST00000577210 GPR19Q15760 415 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 INF2Q27J81 1249 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 RGL3Q3MIN7 710 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 TM4SF20Q53R12 229 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 DALRD3Q5D0E6 543 aaKnown RBP3.58□□□□□ -1.84
COPS3-213ENST00000577210 WWC2Q6AWC2 1192 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 DENND5AQ6IQ26 1287 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 MPZL3Q6UWV2 235 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 BRAPQ7Z569 592 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 CCDC103Q8IW40 242 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 CHAC2Q8WUX2 184 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 MTA3Q9BTC8 594 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 TRIM39Q9HCM9 518 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 TNFRSF12AQ9NP84 129 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 SLC6A20Q9NP91 592 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 BTG4Q9NY30 223 aa3.58□□□□□ -1.84
COPS3-213ENST00000577210 PSPNO60542 156 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 PEX10O60683 326 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 HMGB1P09429 215 aaKnown RBP3.57□□□□□ -1.84
COPS3-213ENST00000577210 GLI4P10075 376 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 MAPKAPK2P49137 400 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 NEK4P51957 841 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 FAPQ12884 760 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 CFAP100Q494V2 611 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 EMC4Q5J8M3 183 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 ZCCHC8Q6NZY4 707 aaKnown RBP3.57□□□□□ -1.84
COPS3-213ENST00000577210 KCNT2Q6UVM3 1135 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 KRT26Q7Z3Y9 468 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 LRRTM3Q86VH5 581 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 SLC7A14Q8TBB6 771 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 PLEKHO2Q8TD55 490 aa3.57□□□□□ -1.84
COPS3-213ENST00000577210 DDX1Q92499 740 aaKnown RBP3.57□□□□□ -1.84
COPS3-213ENST00000577210 DDX11Q96FC9 970 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms