RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 MCCP23508 829 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 FSHRP23945 695 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 TLE2Q04725 743 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 NR5A1Q13285 461 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 MAP7D1Q3KQU3 841 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 MUM1L1Q5H9M0 696 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 TTBK2Q6IQ55 1244 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 CCDC174Q6PII3 467 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 TRAF7Q6Q0C0 670 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 NEDD1Q8NHV4 660 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 KATNBL1Q9H079 304 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 MTMR10Q9NXD2 777 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 TOR4AQ9NXH8 423 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 PHF24Q9UPV7 400 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 SPTBN5Q9NRC6 3674 aaKnown RBP10.96□□□□□ -0.66
NPLOC4-210ENST00000572824 MYH6P13533 1939 aa10.96□□□□□ -0.66
NPLOC4-210ENST00000572824 FRMPD2Q68DX3 1309 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 CTAGE5O15320 804 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 TTLL1O95922 423 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 TSPY3P0CV98 308 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 TSPY8P0CW00 308 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 RARBP10826 455 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 BMP3P12645 472 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 RFX1P22670 979 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 PDE1AP54750 535 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 RAB15P59190 212 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 HAND2P61296 217 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 BEX3Q00994 111 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 NMIQ13287 307 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 FAM109BQ6ICB4 259 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 ZNF444Q8N0Y2 327 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 CYP4X1Q8N118 509 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 GMCL1P1Q8NEA9 526 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 PPP1R13LQ8WUF5 828 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 MKL1Q969V6 931 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 LNPKQ9C0E8 428 aa10.95□□□□□ -0.66
NPLOC4-210ENST00000572824 TTC24A2A3L6 582 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 ERVH48-1M5A8F1 160 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 IGHDP01880 384 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 GNAT2P19087 354 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 SLC16A2P36021 539 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 CCSAPQ6IQ19 270 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 B4GALNT3Q6L9W6 998 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 ARMCX2Q7L311 632 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 TBC1D10CQ8IV04 446 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 PLEKHM2Q8IWE5 1019 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 CCDC144CPQ8IYA2 1237 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 PRPF38AQ8NAV1 312 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 ARRDC4Q8NCT1 418 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 IL25Q9H293 177 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 CPVLQ9H3G5 476 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 A1CFQ9NQ94 594 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 RNF146Q9NTX7 359 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 STX8Q9UNK0 236 aa10.94□□□□□ -0.66
NPLOC4-210ENST00000572824 NEDD4P46934 1319 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 J3QL48 77 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 ATP2A1O14983 1001 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 ERC2O15083 957 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 NR3C2P08235 984 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 ALAS1P13196 640 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 AKR1A1P14550 325 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 SLC1A4P43007 532 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 ACLYP53396 1101 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 KCNA10Q16322 511 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 CCDC144BQ3MJ40 725 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 RRP12Q5JTH9 1297 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 EEPD1Q7L9B9 569 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 FBXO16Q8IX29 292 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 ANKRD35Q8N283 1001 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 DEPDC4Q8N2C3 294 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 FAM133AQ8N9E0 248 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 SLC17A8Q8NDX2 589 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 KLHDC9Q8NEP7 349 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 DDX11Q96FC9 970 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 LBHD1Q9BQE6 289 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 TTYH1Q9H313 450 aaPredicted RBP10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 PDGFCQ9NRA1 345 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 SLC5A4Q9NY91 659 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 FEM1BQ9UK73 627 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 PRR12Q9ULL5 1215 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 DOLKQ9UPQ8 538 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 CNPY2Q9Y2B0 182 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 PCDHB11Q9Y5F2 797 aa10.93□□□□□ -0.66
NPLOC4-210ENST00000572824 UMODL1Q5DID0 1318 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 SYNGAP1Q96PV0 1343 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 TSPY2A6NKD2 308 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 LZTS3O60299 673 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 RANBP6O60518 1105 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 ZBED4O75132 1171 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 CLTBP09497 229 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 C6orf222P0C671 652 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 PDE4BQ07343 736 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 FAAP100Q0VG06 881 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 IKQ13123 557 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 ACVR2BQ13705 512 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 CCDC96Q2M329 555 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 MAMDC4Q6UXC1 1216 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 CCDC116Q8IYX3 515 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 EXOC6Q8TAG9 804 aa10.92□□□□□ -0.66
NPLOC4-210ENST00000572824 NACAP1Q9BZK3 213 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms