RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.77□□□□□ -1.01
CNOT1-222ENST00000570139 CEMIPQ8WUJ3 1361 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 E2F8A0AVK6 867 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 TMPRSS2O15393 492 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 OPA1O60313 960 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 KATNA1O75449 491 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 HSP90AB1P08238 724 aaKnown RBP8.76□□□□□ -1.01
CNOT1-222ENST00000570139 CD68P34810 354 aaPredicted RBP8.76□□□□□ -1.01
CNOT1-222ENST00000570139 MCL1Q07820 350 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 GAS6Q14393 721 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 HLTFQ14527 1009 aaKnown RBP eCLIP8.76□□□□□ -1.01
CNOT1-222ENST00000570139 SETDB1Q15047 1291 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 ALDH1L2Q3SY69 923 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 BRAPQ7Z569 592 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 PMM1Q92871 262 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 RCC1LQ96I51 464 aaKnown RBP8.76□□□□□ -1.01
CNOT1-222ENST00000570139 CRIM1Q9NZV1 1036 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 NDOR1Q9UHB4 597 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 SPATA31A6Q5VVP1 1343 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 KIF16BQ96L93 1317 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 MRC1P22897 1456 aa8.76□□□□□ -1.01
CNOT1-222ENST00000570139 MEGF6O75095 1541 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 GPR39O43194 453 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 ITGA4P13612 1032 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 NTF4P34130 210 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 IGFALSP35858 605 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 GNALP38405 381 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 RNF4P78317 190 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 CHRNA2Q15822 529 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 DCAF15Q66K64 600 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 ZNF530Q6P9A1 599 aaPredicted RBP8.75□□□□□ -1.01
CNOT1-222ENST00000570139 STRA8Q7Z7C7 330 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 SPATS2Q86XZ4 545 aaKnown RBP8.75□□□□□ -1.01
CNOT1-222ENST00000570139 ZNF513Q8N8E2 541 aaPredicted RBP8.75□□□□□ -1.01
CNOT1-222ENST00000570139 GSTCDQ8NEC7 633 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 BAHD1Q8TBE0 780 aaPredicted RBP8.75□□□□□ -1.01
CNOT1-222ENST00000570139 SLC52A2Q9HAB3 445 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 FBRSQ9HAH7 460 aa8.75□□□□□ -1.01
CNOT1-222ENST00000570139 LRP6O75581 1613 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 B4E1Z4 1266 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 M0R082 166 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 CHL1O00533 1208 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 TM4SF5O14894 197 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 CST3P01034 146 aaPredicted RBP8.74□□□□□ -1.01
CNOT1-222ENST00000570139 CAPNS1P04632 268 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 KRT18P05783 430 aaKnown RBP8.74□□□□□ -1.01
CNOT1-222ENST00000570139 C6orf222P0C671 652 aaPredicted RBP8.74□□□□□ -1.01
CNOT1-222ENST00000570139 EPXP11678 715 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 CD247P20963 164 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 RHBDL3P58872 404 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 BIRC2Q13490 618 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 PKN3Q6P5Z2 889 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 TOM1L2Q6ZVM7 507 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 TRIM59Q8IWR1 403 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 USHBP1Q8N6Y0 703 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 GALNT11Q8NCW6 608 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 ZNF417Q8TAU3 575 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 SLC7A14Q8TBB6 771 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 MTMR8Q96EF0 704 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 MRGPRX3Q96LB0 322 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 CCDC140Q96MF4 163 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 ZNF587Q96SQ5 575 aaPredicted RBP8.74□□□□□ -1.01
CNOT1-222ENST00000570139 TTC1Q99614 292 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 DPH2Q9BQC3 489 aaPredicted RBP8.74□□□□□ -1.01
CNOT1-222ENST00000570139 PUS7LQ9H0K6 701 aaKnown RBP8.74□□□□□ -1.01
CNOT1-222ENST00000570139 AKT3Q9Y243 479 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 TNPO3Q9Y5L0 923 aaKnown RBP8.74□□□□□ -1.01
CNOT1-222ENST00000570139 PCDH11XQ9BZA7 1347 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 PCDH11YQ9BZA8 1340 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
CNOT1-222ENST00000570139 FAM83GA6ND36 823 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 DLGAP3O95886 979 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 SCGB1D2O95969 90 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 IL2RBP14784 551 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 GRIA2P42262 883 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 RARSP54136 660 aaKnown RBP8.73□□□□□ -1.01
CNOT1-222ENST00000570139 EXOSC9Q06265 439 aaKnown RBP8.73□□□□□ -1.01
CNOT1-222ENST00000570139 ITKQ08881 620 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 HDAC1Q13547 482 aaPredicted RBP8.73□□□□□ -1.01
CNOT1-222ENST00000570139 MTMR1Q13613 665 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 NKG7Q16617 165 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 PRAMEF13Q5VWM6 474 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 UBE2R2Q712K3 238 aaPredicted RBP8.73□□□□□ -1.01
CNOT1-222ENST00000570139 MCM10Q7L590 875 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 MAMDC2Q7Z304 686 aaPredicted RBP8.73□□□□□ -1.01
CNOT1-222ENST00000570139 C7orf61Q8IZ16 206 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 IFNL2Q8IZJ0 200 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 KCTD13Q8WZ19 329 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 PTPRN2Q92932 1015 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 USP7Q93009 1102 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 FANCD2OSQ96PS1 177 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 PRDM6Q9NQX0 595 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 PPP1R9AQ9ULJ8 1098 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 AP4E1Q9UPM8 1137 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 EMC9Q9Y3B6 208 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 SLIT2O94813 1529 aa8.73□□□□□ -1.01
CNOT1-222ENST00000570139 CACNA1FO60840 1977 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 A0A087WZG4 1122 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 SHTN1A0MZ66 631 aa8.72□□□□□ -1.01
CNOT1-222ENST00000570139 IPO8O15397 1037 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms