RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 CTCFLQ8NI51 663 aaPredicted RBP21.55■■□□□ 1.04
CPNE7-209ENST00000568977 SCLYQ96I15 445 aa21.55■■□□□ 1.04
CPNE7-209ENST00000568977 MYL10Q9BUA6 226 aa21.55■■□□□ 1.04
CPNE7-209ENST00000568977 ANO2Q9NQ90 1003 aa21.55■■□□□ 1.04
CPNE7-209ENST00000568977 DDX41Q9UJV9 622 aaKnown RBP21.55■■□□□ 1.04
CPNE7-209ENST00000568977 MRVI1Q9Y6F6 885 aa21.55■■□□□ 1.04
CPNE7-209ENST00000568977 GBF1Q92538 1859 aa21.55■■□□□ 1.04
CPNE7-209ENST00000568977 GCOM1H8Y6P7 765 aaPredicted RBP21.54■■□□□ 1.04
CPNE7-209ENST00000568977 POLR2MP0CAP2 368 aa21.54■■□□□ 1.04
CPNE7-209ENST00000568977 MYCLP12524 364 aaPredicted RBP21.54■■□□□ 1.04
CPNE7-209ENST00000568977 PTPN11Q06124 597 aaPredicted RBP21.54■■□□□ 1.04
CPNE7-209ENST00000568977 COL9A3Q14050 684 aaPredicted RBP21.54■■□□□ 1.04
CPNE7-209ENST00000568977 PGM5Q15124 567 aa21.54■■□□□ 1.04
CPNE7-209ENST00000568977 IL31RAQ8NI17 732 aa21.54■■□□□ 1.04
CPNE7-209ENST00000568977 PIBF1Q8WXW3 757 aa21.54■■□□□ 1.04
CPNE7-209ENST00000568977 HERVK_113Q902F9 699 aa21.54■■□□□ 1.04
CPNE7-209ENST00000568977 MTA3Q9BTC8 594 aa21.54■■□□□ 1.04
CPNE7-209ENST00000568977 MTIF3Q9H2K0 278 aaKnown RBP21.54■■□□□ 1.04
CPNE7-209ENST00000568977 GRXCR1A8MXD5 290 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 SH2B2O14492 632 aaPredicted RBP21.53■■□□□ 1.04
CPNE7-209ENST00000568977 FGBP02675 491 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 KIF5BP33176 963 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 MCM5P33992 734 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 CREB3L3Q68CJ9 461 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 FCHSD1Q86WN1 690 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 MYLIPQ8WY64 445 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 EMID1Q96A84 441 aaPredicted RBP21.53■■□□□ 1.04
CPNE7-209ENST00000568977 TIFAQ96CG3 184 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 TMEM87BQ96K49 555 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 MAP3K14Q99558 947 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 SPZ1Q9BXG8 430 aa21.53■■□□□ 1.04
CPNE7-209ENST00000568977 CXXC1Q9P0U4 656 aaPredicted RBP21.53■■□□□ 1.04
CPNE7-209ENST00000568977 RGS20O76081 388 aa21.52■■□□□ 1.04
CPNE7-209ENST00000568977 CHMP4BP1P59074 171 aa21.52■■□□□ 1.04
CPNE7-209ENST00000568977 NECTIN1Q15223 517 aa21.52■■□□□ 1.04
CPNE7-209ENST00000568977 NFXL1Q6ZNB6 911 aa21.52■■□□□ 1.04
CPNE7-209ENST00000568977 OTOP2Q7RTS6 562 aa21.52■■□□□ 1.04
CPNE7-209ENST00000568977 PBX4Q9BYU1 374 aa21.52■■□□□ 1.04
CPNE7-209ENST00000568977 CCDC69A6NI79 296 aa21.51■■□□□ 1.03
CPNE7-209ENST00000568977 CASTP20810 708 aaKnown RBP21.51■■□□□ 1.03
CPNE7-209ENST00000568977 CCND2P30279 289 aa21.51■■□□□ 1.03
CPNE7-209ENST00000568977 PBX2P40425 430 aa21.51■■□□□ 1.03
CPNE7-209ENST00000568977 DGKDQ16760 1214 aa21.51■■□□□ 1.03
CPNE7-209ENST00000568977 VSIG10LQ86VR7 867 aa21.51■■□□□ 1.03
CPNE7-209ENST00000568977 RPUSD2Q8IZ73 545 aaKnown RBP21.51■■□□□ 1.03
CPNE7-209ENST00000568977 KAT2BQ92831 832 aa21.51■■□□□ 1.03
CPNE7-209ENST00000568977 VWCEQ96DN2 955 aa21.51■■□□□ 1.03
CPNE7-209ENST00000568977 NOD1Q9Y239 953 aa21.51■■□□□ 1.03
CPNE7-209ENST00000568977 PLEKHA8P1O95397 391 aa21.5■■□□□ 1.03
CPNE7-209ENST00000568977 PFKMP08237 780 aa21.5■■□□□ 1.03
CPNE7-209ENST00000568977 RXRAP19793 462 aa21.5■■□□□ 1.03
CPNE7-209ENST00000568977 LAMC2Q13753 1193 aa21.5■■□□□ 1.03
CPNE7-209ENST00000568977 SESTD1Q86VW0 696 aa21.5■■□□□ 1.03
CPNE7-209ENST00000568977 DHX37Q8IY37 1157 aaKnown RBP21.5■■□□□ 1.03
CPNE7-209ENST00000568977 PPTC7Q8NI37 304 aa21.5■■□□□ 1.03
CPNE7-209ENST00000568977 RRP36Q96EU6 259 aaKnown RBP21.5■■□□□ 1.03
CPNE7-209ENST00000568977 TRIP12Q14669 1992 aaPredicted RBP21.5■■□□□ 1.03
CPNE7-209ENST00000568977 FRMPD4Q14CM0 1322 aa21.5■■□□□ 1.03
CPNE7-209ENST00000568977 PITPNM1O00562 1244 aa21.49■■□□□ 1.03
CPNE7-209ENST00000568977 ZNF286BP0CG31 522 aa21.49■■□□□ 1.03
CPNE7-209ENST00000568977 FOSL2P15408 326 aa21.49■■□□□ 1.03
CPNE7-209ENST00000568977 UBA1P22314 1058 aaKnown RBP21.49■■□□□ 1.03
CPNE7-209ENST00000568977 KCNV1Q6PIU1 500 aa21.49■■□□□ 1.03
CPNE7-209ENST00000568977 TMTC2Q8N394 836 aa21.49■■□□□ 1.03
CPNE7-209ENST00000568977 MAFAQ8NHW3 353 aaPredicted RBP21.49■■□□□ 1.03
CPNE7-209ENST00000568977 ZFP91Q96JP5 570 aaPredicted RBP21.49■■□□□ 1.03
CPNE7-209ENST00000568977 LZTS2Q9BRK4 669 aa21.49■■□□□ 1.03
CPNE7-209ENST00000568977 ZNF576Q9H609 170 aa21.49■■□□□ 1.03
CPNE7-209ENST00000568977 SEC63Q9UGP8 760 aaKnown RBP21.49■■□□□ 1.03
CPNE7-209ENST00000568977 MYO9BQ13459 2157 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 GGPS1O95749 300 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 F2P00734 622 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 SMARCA1P28370 1054 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 LIFRP42702 1097 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 GNAQP50148 359 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 GRIN2CQ14957 1233 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 PTGISQ16647 500 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 GDF6Q6KF10 455 aaPredicted RBP21.48■■□□□ 1.03
CPNE7-209ENST00000568977 DEFB128Q7Z7B8 93 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 KATNAL1Q9BW62 490 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 LRRC2Q9BYS8 371 aa21.48■■□□□ 1.03
CPNE7-209ENST00000568977 DOCK5Q9H7D0 1870 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 TET1Q8NFU7 2136 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 ZBBXA8MT70 800 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 SORBS3O60504 671 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 CALM1P0DP23 149 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 CALM2P0DP24 149 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 CALM3P0DP25 149 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 HOXD8P13378 290 aaPredicted RBP21.47■■□□□ 1.03
CPNE7-209ENST00000568977 PSEN2P49810 448 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 BFSP2Q13515 415 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 RAB30Q15771 203 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 CELF3Q5SZQ8 465 aaKnown RBP21.47■■□□□ 1.03
CPNE7-209ENST00000568977 RNF20Q5VTR2 975 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 MYSM1Q5VVJ2 828 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 RAB11FIP4Q86YS3 637 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 CMTR1Q8N1G2 835 aaKnown RBP21.47■■□□□ 1.03
CPNE7-209ENST00000568977 SRBD1Q8N5C6 995 aaKnown RBP21.47■■□□□ 1.03
CPNE7-209ENST00000568977 RETREG2Q8NC44 543 aa21.47■■□□□ 1.03
CPNE7-209ENST00000568977 GPKOWQ92917 476 aaPredicted RBP eCLIP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms