RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
LINC00564-201ENST00000567258 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
LINC00564-201ENST00000567258 ABCB11O95342 1321 aa12.09□□□□□ -0.47
LINC00564-201ENST00000567258 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.08□□□□□ -0.48
LINC00564-201ENST00000567258 KIAA0355O15063 1070 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 ADCY6O43306 1168 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 SMPD1P17405 629 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 CPT1AP50416 773 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.48
LINC00564-201ENST00000567258 FAAP100Q0VG06 881 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 TRAF1Q13077 416 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 SHHQ15465 462 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 CDC37Q16543 378 aaPredicted RBP12.08□□□□□ -0.48
LINC00564-201ENST00000567258 ZNF697Q5TEC3 545 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 CCSAPQ6IQ19 270 aaPredicted RBP12.08□□□□□ -0.48
LINC00564-201ENST00000567258 FBXO11Q86XK2 927 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 TMEM199Q8N511 208 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 ANKS1AQ92625 1134 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 MAF1Q9H063 256 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 KATNBL1Q9H079 304 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 PDGFCQ9NRA1 345 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 GNEQ9Y223 722 aaKnown RBP12.08□□□□□ -0.48
LINC00564-201ENST00000567258 MRPL11Q9Y3B7 192 aaKnown RBP12.08□□□□□ -0.48
LINC00564-201ENST00000567258 LAMA3Q16787 3333 aa12.08□□□□□ -0.48
LINC00564-201ENST00000567258 BAZ2BQ9UIF8 2168 aaKnown RBP12.08□□□□□ -0.48
LINC00564-201ENST00000567258 NKRFO15226 690 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00564-201ENST00000567258 TIMP1P01033 207 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 GSPT1P15170 499 aaKnown RBP12.07□□□□□ -0.48
LINC00564-201ENST00000567258 CHMLP26374 656 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 PPIGQ13427 754 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00564-201ENST00000567258 ITGA7Q13683 1181 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 PPP2R5BQ15173 497 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 DUSP28Q4G0W2 176 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 TAPT1Q6NXT6 567 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 CXCL17Q6UXB2 119 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 SLC30A10Q6XR72 485 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 RGS22Q8NE09 1264 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 NCOA7Q8NI08 942 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 MORC4Q8TE76 937 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 SCFD2Q8WU76 684 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 CLEC4DQ8WXI8 215 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 RNPC3Q96LT9 517 aaKnown RBP12.07□□□□□ -0.48
LINC00564-201ENST00000567258 PURBQ96QR8 312 aaKnown RBP12.07□□□□□ -0.48
LINC00564-201ENST00000567258 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
LINC00564-201ENST00000567258 IFIT3O14879 490 aaKnown RBP12.06□□□□□ -0.48
LINC00564-201ENST00000567258 NKX3-2P78367 333 aa12.06□□□□□ -0.48
LINC00564-201ENST00000567258 FAM109BQ6ICB4 259 aaPredicted RBP12.06□□□□□ -0.48
LINC00564-201ENST00000567258 Q7L0L9 218 aa12.06□□□□□ -0.48
LINC00564-201ENST00000567258 SLC17A8Q8NDX2 589 aa12.06□□□□□ -0.48
LINC00564-201ENST00000567258 OR6J1Q8NGC5 347 aa12.06□□□□□ -0.48
LINC00564-201ENST00000567258 NSUN6Q8TEA1 469 aaKnown RBP12.06□□□□□ -0.48
LINC00564-201ENST00000567258 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
LINC00564-201ENST00000567258 CPVLQ9H3G5 476 aa12.06□□□□□ -0.48
LINC00564-201ENST00000567258 KLRF2D3W0D1 207 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 MYL3P08590 195 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 CDK7P50613 346 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 TTLL4Q14679 1199 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 WTAPQ15007 396 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 QRICH1Q2TAL8 776 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 C9orf50Q5SZB4 431 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 ARHGEF16Q5VV41 709 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 MFSD5Q6N075 450 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 PADI6Q6TGC4 694 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 TTC13Q8NBP0 860 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 AMNQ9BXJ7 453 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 PPP1R12CQ9BZL4 782 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 DDX49Q9Y6V7 483 aaKnown RBP12.05□□□□□ -0.48
LINC00564-201ENST00000567258 ASTN1O14525 1302 aa12.05□□□□□ -0.48
LINC00564-201ENST00000567258 KPNA6O60684 536 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 CFBP00751 764 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 CYP21A2P08686 494 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 SUPT20HL2P0C7V6 817 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 TXNP10599 105 aaKnown RBP12.04□□□□□ -0.48
LINC00564-201ENST00000567258 SMAD3P84022 425 aaKnown RBP12.04□□□□□ -0.48
LINC00564-201ENST00000567258 PTH1RQ03431 593 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 STXBP2Q15833 593 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 CASC1Q6TDU7 716 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 CYB5R4Q7L1T6 521 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 CATIPQ7Z7H3 387 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 FAM126BQ8IXS8 530 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 FAM161BQ96MY7 647 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 IWS1Q96ST2 819 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 RMDN3Q96TC7 470 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 MTIF3Q9H2K0 278 aaKnown RBP12.04□□□□□ -0.48
LINC00564-201ENST00000567258 JMJD4Q9H9V9 463 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 MTMR10Q9NXD2 777 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 STXBP5LQ9Y2K9 1186 aa12.04□□□□□ -0.48
LINC00564-201ENST00000567258 TRIP12Q14669 1992 aaPredicted RBP12.03□□□□□ -0.48
LINC00564-201ENST00000567258 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.03□□□□□ -0.48
LINC00564-201ENST00000567258 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.03□□□□□ -0.48
LINC00564-201ENST00000567258 RBM47A0AV96 593 aaKnown RBP12.03□□□□□ -0.48
LINC00564-201ENST00000567258 E7EWF7 191 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 ZBTB5O15062 677 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 CTAGE5O15320 804 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 SGSM2O43147 1006 aa12.03□□□□□ -0.48
LINC00564-201ENST00000567258 ITGB8P26012 769 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms