RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 MMP3P08254 477 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 MYL3P08590 195 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 GNAQP50148 359 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 DGKDQ16760 1214 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 BMP2KLQ5H9B9 411 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 PPTC7Q8NI37 304 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 LSG1Q9H089 658 aaKnown RBP17.6■□□□□ 0.41
CMTM3-212ENST00000566121 RBM8AQ9Y5S9 174 aaKnown RBP17.6■□□□□ 0.41
CMTM3-212ENST00000566121 FRMPD4Q14CM0 1322 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 VCANP13611 3396 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 MYH6P13533 1939 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 GCOM1H8Y6P7 765 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-212ENST00000566121 RGS20O76081 388 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 POLR2MP0CAP2 368 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 KIF5BP33176 963 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 MCM5P33992 734 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 NECTIN1Q15223 517 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 RAB30Q15771 203 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 TMEM67Q5HYA8 995 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 XRRA1Q6P2D8 792 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 CAGE1Q8TC20 777 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 KAT2BQ92831 832 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 COPS5Q92905 334 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 TIFAQ96CG3 184 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 LY9Q9HBG7 655 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 TRMT13Q9NUP7 481 aaKnown RBP17.59■□□□□ 0.41
CMTM3-212ENST00000566121 TAF6LQ9Y6J9 622 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 KIAA1217Q5T5P2 1943 aa17.59■□□□□ 0.41
CMTM3-212ENST00000566121 UMODL1Q5DID0 1318 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 HAS3O00219 553 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 PIK3CDO00329 1044 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 BFSP2Q13515 415 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 LY6KQ17RY6 165 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 TSGA10IPQ3SY00 556 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 MYSM1Q5VVJ2 828 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 SEPT14Q6ZU15 432 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 PHOSPHO2Q8TCD6 241 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 AFG1LQ8WV93 481 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 PIGSQ96S52 555 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 ESYT1Q9BSJ8 1104 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 KATNAL1Q9BW62 490 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 PBX4Q9BYU1 374 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 ZNF576Q9H609 170 aa17.58■□□□□ 0.4
CMTM3-212ENST00000566121 SPTBN5Q9NRC6 3674 aaKnown RBP17.58■□□□□ 0.4
CMTM3-212ENST00000566121 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
CMTM3-212ENST00000566121 CALM1P0DP23 149 aa17.57■□□□□ 0.4
CMTM3-212ENST00000566121 CALM2P0DP24 149 aa17.57■□□□□ 0.4
CMTM3-212ENST00000566121 CALM3P0DP25 149 aa17.57■□□□□ 0.4
CMTM3-212ENST00000566121 ACRP10323 421 aa17.57■□□□□ 0.4
CMTM3-212ENST00000566121 EIF2AK2P19525 551 aaKnown RBP17.57■□□□□ 0.4
CMTM3-212ENST00000566121 ICAM3P32942 547 aa17.57■□□□□ 0.4
CMTM3-212ENST00000566121 PGM5Q15124 567 aa17.57■□□□□ 0.4
CMTM3-212ENST00000566121 CENPQQ7L2Z9 268 aaPredicted RBP17.57■□□□□ 0.4
CMTM3-212ENST00000566121 SENP2Q9HC62 589 aa17.57■□□□□ 0.4
CMTM3-212ENST00000566121 MRVI1Q9Y6F6 885 aa17.57■□□□□ 0.4
CMTM3-212ENST00000566121 MYO9BQ13459 2157 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 F2P00734 622 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 IQCF3P0C7M6 154 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 CCND2P30279 289 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 CCL23P55773 120 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 CELF3Q5SZQ8 465 aaKnown RBP17.56■□□□□ 0.4
CMTM3-212ENST00000566121 CASC1Q6TDU7 716 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 SGMS1Q86VZ5 419 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 ZNF654Q8IZM8 581 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 CCDC155Q8N6L0 562 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 RETREG2Q8NC44 543 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 CTCFLQ8NI51 663 aaPredicted RBP17.56■□□□□ 0.4
CMTM3-212ENST00000566121 AFAP1L1Q8TED9 768 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 FAM161BQ96MY7 647 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 INPP4AQ96PE3 977 aaPredicted RBP17.56■□□□□ 0.4
CMTM3-212ENST00000566121 CTAGE1Q96RT6 745 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 CXXC1Q9P0U4 656 aaPredicted RBP17.56■□□□□ 0.4
CMTM3-212ENST00000566121 MSRAQ9UJ68 235 aa17.56■□□□□ 0.4
CMTM3-212ENST00000566121 SH2B2O14492 632 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-212ENST00000566121 SLC27A2O14975 620 aa17.55■□□□□ 0.4
CMTM3-212ENST00000566121 CYP2C9P11712 490 aa17.55■□□□□ 0.4
CMTM3-212ENST00000566121 ACTN1P12814 892 aa17.55■□□□□ 0.4
CMTM3-212ENST00000566121 IRX6P78412 446 aaPredicted RBP17.55■□□□□ 0.4
CMTM3-212ENST00000566121 GRIN2CQ14957 1233 aa17.55■□□□□ 0.4
CMTM3-212ENST00000566121 DHX37Q8IY37 1157 aaKnown RBP17.55■□□□□ 0.4
CMTM3-212ENST00000566121 SENP7Q9BQF6 1050 aa17.55■□□□□ 0.4
CMTM3-212ENST00000566121 GTF2IRD1Q9UHL9 959 aa17.55■□□□□ 0.4
CMTM3-212ENST00000566121 PCDHA11Q9Y5I1 949 aa17.55■□□□□ 0.4
CMTM3-212ENST00000566121 SLC4A7Q9Y6M7 1214 aa17.55■□□□□ 0.4
CMTM3-212ENST00000566121 DLL1O00548 723 aa17.54■□□□□ 0.4
CMTM3-212ENST00000566121 PRC1O43663 620 aa17.54■□□□□ 0.4
CMTM3-212ENST00000566121 BAIAP3O94812 1187 aa17.54■□□□□ 0.4
CMTM3-212ENST00000566121 PTGISQ16647 500 aa17.54■□□□□ 0.4
CMTM3-212ENST00000566121 GNPTABQ3T906 1256 aa17.54■□□□□ 0.4
CMTM3-212ENST00000566121 CREB3L3Q68CJ9 461 aa17.54■□□□□ 0.4
CMTM3-212ENST00000566121 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.54■□□□□ 0.4
CMTM3-212ENST00000566121 MAFAQ8NHW3 353 aaPredicted RBP17.54■□□□□ 0.4
CMTM3-212ENST00000566121 RRP36Q96EU6 259 aaKnown RBP17.54■□□□□ 0.4
CMTM3-212ENST00000566121 NCOR1O75376 2440 aa17.54■□□□□ 0.4
CMTM3-212ENST00000566121 SPATA31C2B4DYI2 1134 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 CXCL10P02778 98 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 FOSL2P15408 326 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 HOXC8P31273 242 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 PSEN2P49810 448 aa17.53■□□□□ 0.4
CMTM3-212ENST00000566121 PTK7Q13308 1070 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms