RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SPATA5Q8NB90 893 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 ARRDC4Q8NCT1 418 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 ZNF280CQ8ND82 737 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 MRIQ9BWK5 157 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBFD1-204ENST00000565634 ECHDC1Q9NTX5 307 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 ATRNL1Q5VV63 1379 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 RPAP1Q9BWH6 1393 aaPredicted RBP7.4□□□□□ -1.22
UBFD1-204ENST00000565634 SCN5AQ14524 2016 aa7.4□□□□□ -1.23
UBFD1-204ENST00000565634 MCM3APO60318 1980 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 EPOPA6NHQ4 379 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 SHISA8B8ZZ34 492 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 KRT37O76014 449 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 PGK1P00558 417 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 CSF2RAP15509 400 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 SNRPNP63162 240 aaKnown RBP7.39□□□□□ -1.23
UBFD1-204ENST00000565634 FAAP100Q0VG06 881 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 C4orf17Q53FE4 359 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 CAVIN4Q5BKX8 364 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 FAM47AQ5JRC9 791 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 CCDC158Q5M9N0 1113 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 ADGRA1Q86SQ6 560 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 SLC44A5Q8NCS7 719 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 STK32AQ8WU08 396 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 TBC1D22AQ8WUA7 517 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 SOCS4Q8WXH5 440 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 LENG1Q96BZ8 264 aaPredicted RBP7.39□□□□□ -1.23
UBFD1-204ENST00000565634 ZSCAN10Q96SZ4 725 aaPredicted RBP7.39□□□□□ -1.23
UBFD1-204ENST00000565634 SEC62Q99442 399 aaKnown RBP7.39□□□□□ -1.23
UBFD1-204ENST00000565634 DNAJC2Q99543 621 aaKnown RBP7.39□□□□□ -1.23
UBFD1-204ENST00000565634 APBA2Q99767 749 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 HAUS7Q99871 368 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 SPOCK3Q9BQ16 436 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 OXCT2Q9BYC2 517 aaPredicted RBP7.39□□□□□ -1.23
UBFD1-204ENST00000565634 IL25Q9H293 177 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 SLC28A3Q9HAS3 691 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 MSRAQ9UJ68 235 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 ZMIZ1Q9ULJ6 1067 aa7.39□□□□□ -1.23
UBFD1-204ENST00000565634 MSTNO14793 375 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 KIAA0355O15063 1070 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 ERC2O15083 957 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 CNMDO75829 334 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 SDSP20132 328 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 MAPK4P31152 587 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 SEMA3FQ13275 785 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 SNX17Q15036 470 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 ZYXQ15942 572 aaKnown RBP7.38□□□□□ -1.23
UBFD1-204ENST00000565634 OTOP2Q7RTS6 562 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 ZNF512BQ96KM6 892 aaPredicted RBP7.38□□□□□ -1.23
UBFD1-204ENST00000565634 FAM86C1Q9NVL1 165 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 ABCF2Q9UG63 623 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 TRIP12Q14669 1992 aaPredicted RBP7.38□□□□□ -1.23
UBFD1-204ENST00000565634 MYH7P12883 1935 aa7.38□□□□□ -1.23
UBFD1-204ENST00000565634 A0A1B0GTH6 734 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 TCRBV5S4A2TA0A5A2 114 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 USP17L5A8MUK1 530 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 PRR33A8MZF0 331 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 PROCP04070 461 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 UQCRFS1P1P0C7P4 283 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 CYBAP13498 195 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 MSX1P28360 303 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 MAP2K3P46734 347 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 DYNLL1P63167 89 aaKnown RBP7.37□□□□□ -1.23
UBFD1-204ENST00000565634 MECOMQ03112 1051 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 PABPC4Q13310 644 aaKnown RBP eCLIP7.37□□□□□ -1.23
UBFD1-204ENST00000565634 AAK1Q2M2I8 961 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 TTC22Q5TAA0 569 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 SPRED2Q7Z698 418 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 RILPL2Q969X0 211 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 FAM227BQ96M60 508 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 RUBCNLQ9H714 662 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 PAG1Q9NWQ8 432 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 DENND2AQ9ULE3 1009 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 MTCH2Q9Y6C9 303 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 TET1Q8NFU7 2136 aa7.37□□□□□ -1.23
UBFD1-204ENST00000565634 A0A0G2JMZ2 1700 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 MAST3O60307 1309 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 TTC41PQ6P2S7 1318 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 C2CD2LO14523 706 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 ATP9BO43861 1147 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 COBLO75128 1261 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 TIMP1P01033 207 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 LDHBP07195 334 aaKnown RBP7.36□□□□□ -1.23
UBFD1-204ENST00000565634 TAL1P17542 331 aaPredicted RBP7.36□□□□□ -1.23
UBFD1-204ENST00000565634 CYP2C18P33260 490 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 CAP2P40123 477 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 TMEM164Q5U3C3 297 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 TMEM214Q6NUQ4 689 aaKnown RBP7.36□□□□□ -1.23
UBFD1-204ENST00000565634 DPP9Q86TI2 863 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 GALNT6Q8NCL4 622 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 OSBP2Q969R2 916 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 NSUN4Q96CB9 384 aaKnown RBP7.36□□□□□ -1.23
UBFD1-204ENST00000565634 PUS7LQ9H0K6 701 aaKnown RBP7.36□□□□□ -1.23
UBFD1-204ENST00000565634 ETNK1Q9HBU6 452 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 GNL3LQ9NVN8 582 aaKnown RBP7.36□□□□□ -1.23
UBFD1-204ENST00000565634 TMOD4Q9NZQ9 345 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 RAI14Q9P0K7 980 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 BTBD7Q9P203 1132 aa7.36□□□□□ -1.23
UBFD1-204ENST00000565634 BAZ2AQ9UIF9 1905 aaKnown RBP7.36□□□□□ -1.23
UBFD1-204ENST00000565634 ZFHX2Q9C0A1 2572 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms