RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 PRR31Q5SQ13 230 aa5.37□□□□□ -1.55
HDGFL3-202ENST00000562702 STK32CQ86UX6 486 aa5.37□□□□□ -1.55
HDGFL3-202ENST00000562702 DNERQ8NFT8 737 aa5.37□□□□□ -1.55
HDGFL3-202ENST00000562702 WRNIP1Q96S55 665 aa5.37□□□□□ -1.55
HDGFL3-202ENST00000562702 HAUS7Q99871 368 aa5.37□□□□□ -1.55
HDGFL3-202ENST00000562702 TESMINQ9Y4I5 508 aa5.37□□□□□ -1.55
HDGFL3-202ENST00000562702 C7orf72A4D263 438 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 PPP1R11O60927 126 aaPredicted RBP5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 VAMP4O75379 141 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 EPHB4P54760 987 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 PURAQ00577 322 aaKnown RBP5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 GNPTABQ3T906 1256 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 SLFN13Q68D06 897 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 MILR1Q7Z6M3 343 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 FAM126BQ8IXS8 530 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 FAM26EQ8N5C1 309 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 IGDCC4Q8TDY8 1250 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 CLIC6Q96NY7 704 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 MARCH2Q9P0N8 246 aa5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 CCDC9Q9Y3X0 531 aaKnown RBP5.36□□□□□ -1.55
HDGFL3-202ENST00000562702 GPR42O15529 346 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 CBFA2T2O43439 604 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 ZNF623O75123 536 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 ZNF28P17035 718 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 KLF10Q13118 480 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 FHL2Q14192 279 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 RBBP8NLQ8NC74 664 aaPredicted RBP5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 CRBNQ96SW2 442 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 MCMBPQ9BTE3 642 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 BARX1Q9HBU1 254 aaPredicted RBP5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 C11orf21Q9P2W6 132 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 FTSJ1Q9UET6 329 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 SUGT1Q9Y2Z0 365 aa5.35□□□□□ -1.55
HDGFL3-202ENST00000562702 WDR33Q9C0J8 1336 aaKnown RBP5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 SGSM2O43147 1006 aa5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 ZNF16P17020 682 aaPredicted RBP5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 IL13P35225 146 aa5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 SLC6A11P48066 632 aa5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 ZYXQ15942 572 aaKnown RBP5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 SPDYAQ5MJ70 313 aa5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 KBTBD2Q8IY47 623 aa5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 CRACR2BQ8N4Y2 399 aaPredicted RBP5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 PLEKHO2Q8TD55 490 aa5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 SYT3Q9BQG1 590 aa5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 KLHL25Q9H0H3 589 aa5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 PHAXQ9H814 394 aaKnown RBP5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 CGGBP1Q9UFW8 167 aaPredicted RBP5.34□□□□□ -1.55
HDGFL3-202ENST00000562702 PATE3B3GLJ2 98 aa5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 C22orf46C9J442 243 aa5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 SMN1Q16637 294 aaKnown RBP5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 MROH9Q5TGP6 573 aa5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 PKN3Q6P5Z2 889 aa5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 KLHL36Q8N4N3 616 aa5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 RCC1LQ96I51 464 aaKnown RBP5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 YTHDC1Q96MU7 727 aaKnown RBP5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 MMP19Q99542 508 aa5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 BTG4Q9NY30 223 aa5.33□□□□□ -1.56
HDGFL3-202ENST00000562702 B4GALT4O60513 344 aa5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 THBDP07204 575 aa5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 STAT5AP42229 794 aa5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 INHBEP58166 350 aa5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 SLC7A5Q01650 507 aa5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 ABHD18Q0P651 414 aa5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 MRPL58Q14197 206 aaKnown RBP5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 CHRNA2Q15822 529 aa5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 ARHGEF39Q8N4T4 335 aa5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 ING1Q9UK53 422 aaPredicted RBP5.32□□□□□ -1.56
HDGFL3-202ENST00000562702 LTBP3Q9NS15 1303 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 ADAM9Q13443 819 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 R3HDM1Q15032 1099 aaKnown RBP5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 PRKD1Q15139 912 aaPredicted RBP5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 POMZP3Q6PJE2 187 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 RUFY4Q6ZNE9 571 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 RIOX2Q8IUF8 465 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 TEX2Q8IWB9 1127 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 FGD4Q96M96 766 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 CLEC1BQ9P126 229 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 CROTQ9UKG9 612 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 ZDHHC9Q9Y397 364 aa5.31□□□□□ -1.56
HDGFL3-202ENST00000562702 EPHX1P07099 455 aa5.3□□□□□ -1.56
HDGFL3-202ENST00000562702 PLS3P13797 630 aa5.3□□□□□ -1.56
HDGFL3-202ENST00000562702 GTF2A2P52657 109 aa5.3□□□□□ -1.56
HDGFL3-202ENST00000562702 CR1LQ2VPA4 569 aa5.3□□□□□ -1.56
HDGFL3-202ENST00000562702 MBD6Q96DN6 1003 aa5.3□□□□□ -1.56
HDGFL3-202ENST00000562702 TOE1Q96GM8 510 aaKnown RBP5.3□□□□□ -1.56
HDGFL3-202ENST00000562702 TMEM209Q96SK2 561 aa5.3□□□□□ -1.56
HDGFL3-202ENST00000562702 COA3Q9Y2R0 106 aaPredicted RBP5.3□□□□□ -1.56
HDGFL3-202ENST00000562702 NPIPB8E9PQR5 432 aa5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 MYO1BO43795 1136 aa5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 RPL11P62913 178 aaKnown RBP5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 NFATC3Q12968 1075 aa5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 FOXE3Q13461 319 aa5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 TRMT10BQ6PF06 316 aaKnown RBP5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 Q8TCH9 128 aa5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 TRMT2BQ96GJ1 504 aaKnown RBP5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 ZSWIM3Q96MP5 696 aa5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 PPT2Q9UMR5 302 aa5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 AKT3Q9Y243 479 aa5.29□□□□□ -1.56
HDGFL3-202ENST00000562702 NAT2P11245 290 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms