RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 KPNA6O60684 536 aa21.53■■□□□ 1.04
PKD1-223ENST00000561668 PDIA3P30101 505 aaKnown RBP21.53■■□□□ 1.04
PKD1-223ENST00000561668 CDC27P30260 824 aa21.53■■□□□ 1.04
PKD1-223ENST00000561668 CCND2P30279 289 aa21.53■■□□□ 1.04
PKD1-223ENST00000561668 KCNV1Q6PIU1 500 aa21.53■■□□□ 1.04
PKD1-223ENST00000561668 KIF2CQ99661 725 aa21.53■■□□□ 1.04
PKD1-223ENST00000561668 PDCD2LQ9BRP1 358 aa21.53■■□□□ 1.04
PKD1-223ENST00000561668 PDRG1Q9NUG6 133 aa21.53■■□□□ 1.04
PKD1-223ENST00000561668 GOLGA8AA7E2F4 631 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 GOLGA8BA8MQT2 603 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 GH1P01241 217 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 MYL3P08590 195 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 RAG1P15918 1043 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 PTGS1P23219 599 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 ITGA7Q13683 1181 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 PGM5Q15124 567 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 NTRK3Q16288 839 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 VSIG10LQ86VR7 867 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 PSTPIP2Q9H939 334 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 PDLIM7Q9NR12 457 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 MRVI1Q9Y6F6 885 aa21.52■■□□□ 1.04
PKD1-223ENST00000561668 CNTNAP5Q8WYK1 1306 aa21.52■■□□□ 1.03
PKD1-223ENST00000561668 LRRC37A2A6NM11 1700 aa21.52■■□□□ 1.03
PKD1-223ENST00000561668 METAP2P50579 478 aaKnown RBP eCLIP21.51■■□□□ 1.03
PKD1-223ENST00000561668 CDK7P50613 346 aa21.51■■□□□ 1.03
PKD1-223ENST00000561668 LY6KQ17RY6 165 aa21.51■■□□□ 1.03
PKD1-223ENST00000561668 HEATR3Q7Z4Q2 680 aa21.51■■□□□ 1.03
PKD1-223ENST00000561668 hCG_1642624A0A1W2PR95 340 aa21.5■■□□□ 1.03
PKD1-223ENST00000561668 TRIM43BA6NCK2 446 aa21.5■■□□□ 1.03
PKD1-223ENST00000561668 ADD1P35611 737 aaKnown RBP21.5■■□□□ 1.03
PKD1-223ENST00000561668 FAAP100Q0VG06 881 aa21.5■■□□□ 1.03
PKD1-223ENST00000561668 CCDC62Q6P9F0 684 aa21.5■■□□□ 1.03
PKD1-223ENST00000561668 SH3RF1Q7Z6J0 888 aa21.5■■□□□ 1.03
PKD1-223ENST00000561668 TDHQ8IZJ6 230 aa21.5■■□□□ 1.03
PKD1-223ENST00000561668 COPS5Q92905 334 aa21.5■■□□□ 1.03
PKD1-223ENST00000561668 BADQ92934 168 aa21.5■■□□□ 1.03
PKD1-223ENST00000561668 TRIM43Q96BQ3 446 aaPredicted RBP21.5■■□□□ 1.03
PKD1-223ENST00000561668 MTG1Q9BT17 334 aaPredicted RBP21.5■■□□□ 1.03
PKD1-223ENST00000561668 V9GY48 417 aaPredicted RBP21.5■■□□□ 1.03
PKD1-223ENST00000561668 DNAH12Q6ZR08 3092 aa21.49■■□□□ 1.03
PKD1-223ENST00000561668 A6NJR5 290 aa21.49■■□□□ 1.03
PKD1-223ENST00000561668 PIK3CDO00329 1044 aa21.49■■□□□ 1.03
PKD1-223ENST00000561668 USP17L6PQ6QN14 398 aa21.49■■□□□ 1.03
PKD1-223ENST00000561668 TEX2Q8IWB9 1127 aa21.49■■□□□ 1.03
PKD1-223ENST00000561668 DHX37Q8IY37 1157 aaKnown RBP21.49■■□□□ 1.03
PKD1-223ENST00000561668 IL27Q8NEV9 243 aa21.49■■□□□ 1.03
PKD1-223ENST00000561668 C22orf23Q9BZE7 217 aa21.49■■□□□ 1.03
PKD1-223ENST00000561668 DDX41Q9UJV9 622 aaKnown RBP21.49■■□□□ 1.03
PKD1-223ENST00000561668 KIAA0355O15063 1070 aa21.48■■□□□ 1.03
PKD1-223ENST00000561668 STAM2O75886 525 aa21.48■■□□□ 1.03
PKD1-223ENST00000561668 ARIH2O95376 493 aa21.48■■□□□ 1.03
PKD1-223ENST00000561668 TGFB3P10600 412 aa21.48■■□□□ 1.03
PKD1-223ENST00000561668 PURAQ00577 322 aaKnown RBP21.48■■□□□ 1.03
PKD1-223ENST00000561668 LAMC2Q13753 1193 aa21.48■■□□□ 1.03
PKD1-223ENST00000561668 ANKRD1Q15327 319 aa21.48■■□□□ 1.03
PKD1-223ENST00000561668 GNPTABQ3T906 1256 aa21.48■■□□□ 1.03
PKD1-223ENST00000561668 BACH2Q9BYV9 841 aa21.48■■□□□ 1.03
PKD1-223ENST00000561668 SPDYE3A6NKU9 549 aa21.47■■□□□ 1.03
PKD1-223ENST00000561668 MEIS2O14770 477 aa21.47■■□□□ 1.03
PKD1-223ENST00000561668 IFNAR1P17181 557 aa21.47■■□□□ 1.03
PKD1-223ENST00000561668 FXR1P51114 621 aaKnown RBP eCLIP21.47■■□□□ 1.03
PKD1-223ENST00000561668 PSMC6P62333 389 aa21.47■■□□□ 1.03
PKD1-223ENST00000561668 AFG1LQ8WV93 481 aa21.47■■□□□ 1.03
PKD1-223ENST00000561668 hCG_1984214I3L0E3 225 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 PRPF3O43395 683 aaKnown RBP21.46■■□□□ 1.03
PKD1-223ENST00000561668 TIMP1P01033 207 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 AK2P54819 239 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 NAPAP54920 295 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 CHMP4BP1P59074 171 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 AKAP17AQ02040 695 aaKnown RBP21.46■■□□□ 1.03
PKD1-223ENST00000561668 DGKDQ16760 1214 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 XRRA1Q6P2D8 792 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 FAM126BQ8IXS8 530 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 ZNF713Q8N859 430 aaPredicted RBP21.46■■□□□ 1.03
PKD1-223ENST00000561668 SLC43A3Q8NBI5 491 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 GPKOWQ92917 476 aaPredicted RBP eCLIP21.46■■□□□ 1.03
PKD1-223ENST00000561668 EHMT1Q9H9B1 1298 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 PCDH10Q9P2E7 1040 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 TPCN1Q9ULQ1 816 aa21.46■■□□□ 1.03
PKD1-223ENST00000561668 SUPT20HL2P0C7V6 817 aa21.45■■□□□ 1.02
PKD1-223ENST00000561668 NEK4P51957 841 aa21.45■■□□□ 1.02
PKD1-223ENST00000561668 ARHGAP1Q07960 439 aa21.45■■□□□ 1.02
PKD1-223ENST00000561668 FAM47CQ5HY64 1035 aa21.45■■□□□ 1.02
PKD1-223ENST00000561668 IL31RAQ8NI17 732 aa21.45■■□□□ 1.02
PKD1-223ENST00000561668 ZFP91Q96JP5 570 aaPredicted RBP21.45■■□□□ 1.02
PKD1-223ENST00000561668 RNF26Q9BY78 433 aaPredicted RBP21.45■■□□□ 1.02
PKD1-223ENST00000561668 MLXIPQ9HAP2 919 aa21.45■■□□□ 1.02
PKD1-223ENST00000561668 RTEL1Q9NZ71 1219 aa21.45■■□□□ 1.02
PKD1-223ENST00000561668 KIAA1217Q5T5P2 1943 aa21.45■■□□□ 1.02
PKD1-223ENST00000561668 PFKFB2O60825 505 aa21.44■■□□□ 1.02
PKD1-223ENST00000561668 MMP3P08254 477 aa21.44■■□□□ 1.02
PKD1-223ENST00000561668 PKN1Q16512 942 aa21.44■■□□□ 1.02
PKD1-223ENST00000561668 PCNX4Q63HM2 1172 aa21.44■■□□□ 1.02
PKD1-223ENST00000561668 NLRX1Q86UT6 975 aa21.44■■□□□ 1.02
PKD1-223ENST00000561668 EMID1Q96A84 441 aaPredicted RBP21.44■■□□□ 1.02
PKD1-223ENST00000561668 TBC1D32Q96NH3 1257 aa21.44■■□□□ 1.02
PKD1-223ENST00000561668 GLT8D2Q9H1C3 349 aa21.44■■□□□ 1.02
PKD1-223ENST00000561668 RGS20O76081 388 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 CD4P01730 458 aa21.43■■□□□ 1.02
PKD1-223ENST00000561668 FPGSQ05932 587 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms