RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 ZKSCAN8Q15776 578 aaPredicted RBP13.26□□□□□ -0.29
HERC1-214ENST00000561400 MCTP1Q6DN14 999 aa13.26□□□□□ -0.29
HERC1-214ENST00000561400 SAMD3Q8N6K7 520 aa13.26□□□□□ -0.29
HERC1-214ENST00000561400 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
HERC1-214ENST00000561400 TAAR1Q96RJ0 339 aa13.26□□□□□ -0.29
HERC1-214ENST00000561400 MAF1Q9H063 256 aa13.26□□□□□ -0.29
HERC1-214ENST00000561400 GJD2Q9UKL4 321 aa13.26□□□□□ -0.29
HERC1-214ENST00000561400 ZDHHC9Q9Y397 364 aa13.26□□□□□ -0.29
HERC1-214ENST00000561400 FAM205CA6NFA0 338 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 FKTNO75072 461 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 COBLO75128 1261 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 U2AF2P26368 475 aaKnown RBP eCLIP13.25□□□□□ -0.297e-7■■■■■ 27
HERC1-214ENST00000561400 FCGRTP55899 365 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 MORN1Q5T089 497 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 FERMT3Q86UX7 667 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 SGSM3Q96HU1 749 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 FOXP1Q9H334 677 aaPredicted RBP13.25□□□□□ -0.29
HERC1-214ENST00000561400 BRMS1Q9HCU9 246 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 CENPFP49454 3210 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 SLC15A5A6NIM6 579 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 FOXD4L5Q5VV16 416 aaPredicted RBP13.25□□□□□ -0.29
HERC1-214ENST00000561400 ZNF771Q7L3S4 317 aaPredicted RBP13.25□□□□□ -0.29
HERC1-214ENST00000561400 ZSCAN30Q86W11 494 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 FOXD4L4Q8WXT5 416 aaPredicted RBP13.25□□□□□ -0.29
HERC1-214ENST00000561400 FGD4Q96M96 766 aa13.25□□□□□ -0.29
HERC1-214ENST00000561400 SOWAHBA6NEL2 793 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 FOXN1O15353 648 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 AP3B2Q13367 1082 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 KIF22Q14807 665 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 USP6NLQ92738 828 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 BORCS6Q96GS4 357 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 GABRQQ9UN88 632 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 DDX49Q9Y6V7 483 aaKnown RBP13.24□□□□□ -0.29
HERC1-214ENST00000561400 HTTP42858 3142 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 MYH15Q9Y2K3 1946 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 BRD1O95696 1058 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 FOSP01100 380 aaPredicted RBP13.24□□□□□ -0.29
HERC1-214ENST00000561400 ZSCAN22P10073 491 aaPredicted RBP13.24□□□□□ -0.29
HERC1-214ENST00000561400 UBXN2AP68543 259 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 ZNF792Q3KQV3 632 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 PIK3AP1Q6ZUJ8 805 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 NOSTRINQ8IVI9 506 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 RMDN3Q96TC7 470 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 ANO3Q9BYT9 981 aa13.24□□□□□ -0.29
HERC1-214ENST00000561400 EDIL3O43854 480 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 HSPA1AP0DMV8 641 aaKnown RBP13.23□□□□□ -0.29
HERC1-214ENST00000561400 HSPA1BP0DMV9 641 aaKnown RBP13.23□□□□□ -0.29
HERC1-214ENST00000561400 RESTQ13127 1097 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
HERC1-214ENST00000561400 DPP9Q86TI2 863 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 NPLOC4Q8TAT6 608 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 ERO1AQ96HE7 468 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 NUDT12Q9BQG2 462 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 PXMP2Q9NR77 195 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 FRMPD4Q14CM0 1322 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 RPTORQ8N122 1335 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 LRRC37A2A6NM11 1700 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 CCDC194A0A1B0GVG4 234 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 EIF2AK2P19525 551 aaKnown RBP13.23□□□□□ -0.29
HERC1-214ENST00000561400 INF2Q27J81 1249 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 KRT25Q7Z3Z0 450 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 IL31RAQ8NI17 732 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 TBCKQ8TEA7 893 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 CRYGNQ8WXF5 182 aa13.23□□□□□ -0.29
HERC1-214ENST00000561400 TCHHQ07283 1943 aa13.22□□□□□ -0.29
HERC1-214ENST00000561400 FLT3LGP49771 235 aa13.22□□□□□ -0.29
HERC1-214ENST00000561400 ALDH5A1P51649 535 aaPredicted RBP13.22□□□□□ -0.29
HERC1-214ENST00000561400 PRKCZQ05513 592 aa13.22□□□□□ -0.29
HERC1-214ENST00000561400 NONOQ15233 471 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■■■□□ 15.3
HERC1-214ENST00000561400 MCTP2Q6DN12 878 aa13.22□□□□□ -0.29
HERC1-214ENST00000561400 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
HERC1-214ENST00000561400 DNERQ8NFT8 737 aa13.22□□□□□ -0.29
HERC1-214ENST00000561400 NSUN6Q8TEA1 469 aaKnown RBP13.22□□□□□ -0.29
HERC1-214ENST00000561400 SOCS4Q8WXH5 440 aa13.22□□□□□ -0.29
HERC1-214ENST00000561400 PDCD2LQ9BRP1 358 aa13.22□□□□□ -0.29
HERC1-214ENST00000561400 KIAA1217Q5T5P2 1943 aa13.22□□□□□ -0.29
HERC1-214ENST00000561400 WNT7AO00755 349 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 F13A1P00488 732 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 HOXC6P09630 235 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 HSPA8P11142 646 aaKnown RBP13.21□□□□□ -0.29
HERC1-214ENST00000561400 CYP2B6P20813 491 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 SREBF1P36956 1147 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 PGM5Q15124 567 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 ARHGEF16Q5VV41 709 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 ZNF513Q8N8E2 541 aaPredicted RBP13.21□□□□□ -0.29
HERC1-214ENST00000561400 MAML3Q96JK9 1138 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 ADD3Q9UEY8 706 aaKnown RBP13.21□□□□□ -0.29
HERC1-214ENST00000561400 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
HERC1-214ENST00000561400 NUCB2P80303 420 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 ARHGAP4P98171 946 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 CCL14Q16627 93 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 SRRDQ9UH36 339 aa13.21□□□□□ -0.29
HERC1-214ENST00000561400 DIS3Q9Y2L1 958 aaKnown RBP13.21□□□□□ -0.29
HERC1-214ENST00000561400 NR3C2P08235 984 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 EDNRBP24530 442 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 RGS2P41220 211 aa13.2□□□□□ -0.3
HERC1-214ENST00000561400 TOB1P50616 345 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms