RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 C1orf53Q5VUE5 145 aa17.81■□□□□ 0.44
RABGGTA-219ENST00000560871 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-219ENST00000560871 KLHDC9Q8NEP7 349 aa17.81■□□□□ 0.44
RABGGTA-219ENST00000560871 SMARCC2Q8TAQ2 1214 aa17.81■□□□□ 0.44
RABGGTA-219ENST00000560871 FERMT2Q96AC1 680 aa17.81■□□□□ 0.44
RABGGTA-219ENST00000560871 TSEN34Q9BSV6 310 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-219ENST00000560871 UPF3AQ9H1J1 476 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-219ENST00000560871 RIC8AQ9NPQ8 531 aa17.81■□□□□ 0.44
RABGGTA-219ENST00000560871 DEXIO95424 95 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 PTGS1P23219 599 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 CLK2P49760 499 aaKnown RBP17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 GJA9P57773 515 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 AKAP17AQ02040 695 aaKnown RBP17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 TNFAIP2Q03169 654 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 SSRP1Q08945 709 aaKnown RBP17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 STXBP2Q15833 593 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 IQSEC1Q6DN90 963 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 VSIG10LQ86VR7 867 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 TRIM22Q8IYM9 498 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 NECAB1Q8N987 351 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 ZMYND12Q9H0C1 365 aa17.8■□□□□ 0.44
RABGGTA-219ENST00000560871 MYADML2A6NDP7 307 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 SMCO2A6NFE2 343 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 CTAGE5O15320 804 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 CDKL5O76039 1030 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 RGS20O76081 388 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 ARIH2O95376 493 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 CST5P28325 142 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 ADCY7P51828 1080 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 IRX5P78411 483 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 MRPS9P82933 396 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 DUSP28Q4G0W2 176 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 CCSAPQ6IQ19 270 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 SCFD2Q8WU76 684 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 ATP11BQ9Y2G3 1177 aa17.79■□□□□ 0.44
RABGGTA-219ENST00000560871 TRIOBPQ9H2D6 2365 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 ADAMTS3O15072 1205 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 EIF3JO75822 258 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 CCND2P30279 289 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 ACLYP53396 1101 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 TRIM60Q495X7 471 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 CCDC62Q6P9F0 684 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 TLK2Q86UE8 772 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 NSUN7Q8NE18 718 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 CCDC12Q8WUD4 166 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 AIFM3Q96NN9 605 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 WDR11Q9BZH6 1224 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 GLT8D2Q9H1C3 349 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 VPS54Q9P1Q0 977 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 PCDHA6Q9UN73 950 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 LIMCH1Q9UPQ0 1083 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 PCDHA8Q9Y5H6 950 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 KIAA1217Q5T5P2 1943 aa17.78■□□□□ 0.44
RABGGTA-219ENST00000560871 A0A1W2PQ45 241 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 A0A1W2PQY0 241 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 MOXD2PA6NHM9 499 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 DTNBO60941 627 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 MYCLP12524 364 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 AP3B2Q13367 1082 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 KCNA10Q16322 511 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 PCNX4Q63HM2 1172 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 CCDC148Q8NFR7 591 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 INPP4AQ96PE3 977 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 ANO3Q9BYT9 981 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 UBE2OQ9C0C9 1292 aaKnown RBP17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 SH3GLB2Q9NR46 395 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 Q9Y3F1 56 aa17.77■□□□□ 0.44
RABGGTA-219ENST00000560871 SPDYE3A6NKU9 549 aa17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 NKRFO15226 690 aaKnown RBP eCLIP17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 STAM2O75886 525 aa17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 MDM2Q00987 491 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 TTLL4Q14679 1199 aa17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 SEPT14Q6ZU15 432 aa17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 IL27Q8NEV9 243 aa17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 ZFP91Q96JP5 570 aaPredicted RBP17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 PGBD1Q96JS3 809 aa17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 TMEM260Q9NX78 707 aa17.76■□□□□ 0.43
RABGGTA-219ENST00000560871 JAK2O60674 1132 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 CD2BP2O95400 341 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 FOSP01100 380 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 C6orf222P0C671 652 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 TXNP10599 105 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 FDPSP14324 419 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 TLE2Q04725 743 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 NPY5RQ15761 445 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 XRRA1Q6P2D8 792 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 TDHQ8IZJ6 230 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 FAM177A1Q8N128 213 aaPredicted RBP17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 PCSK9Q8NBP7 692 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 COPS5Q92905 334 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 SPC25Q9HBM1 224 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 C6orf50Q9HD87 102 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 PRKAG2Q9UGJ0 569 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 DDX41Q9UJV9 622 aaKnown RBP17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 MRVI1Q9Y6F6 885 aa17.75■□□□□ 0.43
RABGGTA-219ENST00000560871 SOX1O00570 391 aaPredicted RBP17.74■□□□□ 0.43
RABGGTA-219ENST00000560871 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
RABGGTA-219ENST00000560871 ST18O60284 1047 aa17.74■□□□□ 0.43
RABGGTA-219ENST00000560871 ASGR1P07306 291 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms