RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 MAP3K20Q9NYL2 800 aaKnown RBP22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 A0A0G2JLL6 359 aaPredicted RBP22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 SPIRE1Q08AE8 756 aa22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 TMEM132BQ14DG7 1078 aa22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 PRRT2Q7Z6L0 340 aaPredicted RBP22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 AOPEPQ8N6M6 819 aa22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 FAM20AQ96MK3 541 aa22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 PNMA5Q96PV4 448 aa22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 BLZF1Q9H2G9 400 aa22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 EHMT1Q9H9B1 1298 aa22.02■■□□□ 1.12
RBFOX1-215ENST00000553186 RPTORQ8N122 1335 aa22.02■■□□□ 1.11
RBFOX1-215ENST00000553186 MSH4O15457 936 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 UBXN2AP68543 259 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 SYTL5Q8TDW5 730 aaPredicted RBP22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 CALML4Q96GE6 196 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 BECN2A8MW95 431 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 ADCY5O95622 1261 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 ZNF76P36508 570 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 LDLRAD1Q5T700 205 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 KRT79Q5XKE5 535 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 MAP1SQ66K74 1059 aaPredicted RBP22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 ARMC9Q7Z3E5 817 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 MAGEF1Q9HAY2 307 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 KCNH4Q9UQ05 1017 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 CLEC11AQ9Y240 323 aa22.01■■□□□ 1.11
RBFOX1-215ENST00000553186 GOLGA6L19H0YKK7 550 aa22■■□□□ 1.11
RBFOX1-215ENST00000553186 CXCL11O14625 94 aa22■■□□□ 1.11
RBFOX1-215ENST00000553186 RPS6P62753 249 aaKnown RBP22■■□□□ 1.11
RBFOX1-215ENST00000553186 NCAPHQ15003 741 aa22■■□□□ 1.11
RBFOX1-215ENST00000553186 SNRNP48Q6IEG0 339 aaKnown RBP22■■□□□ 1.11
RBFOX1-215ENST00000553186 MLKLQ8NB16 471 aa22■■□□□ 1.11
RBFOX1-215ENST00000553186 SNX29Q8TEQ0 813 aa22■■□□□ 1.11
RBFOX1-215ENST00000553186 PTPRFP10586 1907 aa22■■□□□ 1.11
RBFOX1-215ENST00000553186 CEP55Q53EZ4 464 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 POTEEQ6S8J3 1075 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 PROCA1Q8NCQ7 364 aaPredicted RBP21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 RNF146Q9NTX7 359 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 BLOC1S4Q9NUP1 217 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 TRAF5O00463 557 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 MYL1P05976 194 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 HOXA7P31268 230 aaPredicted RBP21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 PLCB2Q00722 1185 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 PPIL2Q13356 520 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 TMEM119Q4V9L6 283 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 RABGAP1Q9Y3P9 1069 aa21.99■■□□□ 1.11
RBFOX1-215ENST00000553186 FMR1Q06787 632 aaKnown RBP eCLIP21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 ECM1Q16610 540 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 HYIQ5T013 277 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 SLC30A10Q6XR72 485 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 TEX13BQ9BXU2 312 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 STK17AQ9UEE5 414 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 FRMPD4Q14CM0 1322 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 MEIS1O00470 390 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 IKBKBO14920 756 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 STAT3P40763 770 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 RNF207Q6ZRF8 634 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 OPTNQ96CV9 577 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 VAV3Q9UKW4 847 aa21.98■■□□□ 1.11
RBFOX1-215ENST00000553186 IL31RAQ8NI17 732 aa21.97■■□□□ 1.11
RBFOX1-215ENST00000553186 RPN1P04843 607 aaKnown RBP21.97■■□□□ 1.11
RBFOX1-215ENST00000553186 GADL1Q6ZQY3 521 aa21.97■■□□□ 1.11
RBFOX1-215ENST00000553186 KCNK18Q7Z418 384 aa21.97■■□□□ 1.11
RBFOX1-215ENST00000553186 PLA2G4DQ86XP0 818 aa21.97■■□□□ 1.11
RBFOX1-215ENST00000553186 TAAR1Q96RJ0 339 aa21.97■■□□□ 1.11
RBFOX1-215ENST00000553186 COL11A1P12107 1806 aaPredicted RBP21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 ITGB5P18084 799 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 MOGSQ13724 837 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 SARM1Q6SZW1 724 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 NSMFQ6X4W1 530 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 LBX2Q6XYB7 198 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 CDK5RAP3Q96JB5 506 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 ZFP91Q96JP5 570 aaPredicted RBP21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 TRIM9Q9C026 710 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 HSD3B7Q9H2F3 369 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 RRAGCQ9HB90 399 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 LOC285556D6RIA3 1793 aa21.96■■□□□ 1.11
RBFOX1-215ENST00000553186 KLRC4O43908 158 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 BAATQ14032 418 aaPredicted RBP21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 SLC5A5Q92911 643 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 MXRA8Q9BRK3 442 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 DACH1Q9UI36 760 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 SMTNL1A8MU46 457 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 SLC26A4O43511 780 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 PSMD10O75832 226 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 CCT6AP40227 531 aaKnown RBP21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 SETQ01105 290 aaPredicted RBP21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 MYL5Q02045 173 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 TKFCQ3LXA3 575 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 PCNX4Q63HM2 1172 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 LARP4BQ92615 738 aaKnown RBP21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 RAD54LQ92698 747 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 C7orf25Q9BPX7 421 aa21.95■■□□□ 1.1
RBFOX1-215ENST00000553186 KDM3AQ9Y4C1 1321 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 ARP10275 920 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 CD44P16070 742 aaKnown RBP21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 GJA5P36382 358 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 MRPS9P82933 396 aaKnown RBP21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 PURBQ96QR8 312 aaKnown RBP21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 MED15Q96RN5 788 aa21.94■■□□□ 1.1
RBFOX1-215ENST00000553186 RMND1Q9NWS8 449 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms